Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 0.0e+00 1347.4 709 100.0
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 0.0e+00 1177.2 721 89.9
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 0.0e+00 1091.3 719 83.3
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 0.0e+00 1083.2 725 83.0
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 4.9e-312 1074.3 720 82.8
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.7e-297 1025.0 727 78.3
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 2.9e-267 925.2 727 73.3
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 2.9e-267 925.2 727 73.3
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 6.1e-265 917.5 726 73.0
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 6.1e-265 917.5 726 73.0
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 7.0e-253 877.5 738 71.7
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 9.5e-250 867.1 723 71.4
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 5.4e-245 851.3 724 70.2
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 3.0e-243 845.5 726 70.2
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 3.9e-243 845.1 726 70.2
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 2.7e-236 822.4 744 67.2
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 6.6e-235 817.8 724 68.9
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 4.1e-192 675.6 751 56.1
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 9.4e-189 664.5 755 56.4
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 2.1e-108 397.5 843 38.3
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 3.3e-93 347.1 783 37.5
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 2.1e-92 344.4 765 37.8
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 8.1e-92 342.4 778 37.0
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 8.1e-92 342.4 777 37.5
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.1e-91 342.0 790 37.2
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 3.1e-91 340.5 778 36.8
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.5e-88 330.9 780 36.4
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.5e-88 330.9 783 35.5
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 3.5e-87 327.0 781 36.1
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 3.0e-86 323.9 775 34.8
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 3.0e-86 323.9 787 35.5
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 5.1e-86 323.2 774 37.9
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 2.5e-80 304.3 772 36.7
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 4.6e-79 300.1 785 34.9
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.0e-78 298.9 762 35.6
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.3e-78 298.5 774 36.4
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 7.4e-77 292.7 794 37.7
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 3.7e-76 290.4 765 35.2
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 1.4e-75 288.5 754 34.4
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 9.0e-75 285.8 850 33.4
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 1.0e-73 282.3 790 34.9
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 8.5e-73 279.3 771 34.6
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 7.2e-72 276.2 775 33.8
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 2.7e-71 274.2 793 36.4
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 3.6e-71 273.9 763 32.8
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 2.3e-70 271.2 780 32.9
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 3.3e-69 267.3 764 32.5
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 9.7e-69 265.8 763 32.6
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 2.2e-68 264.6 796 35.2
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 3.7e-68 263.8 786 33.5
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 4.8e-68 263.5 790 33.9
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 5.3e-67 260.0 791 34.0
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 9.1e-67 259.2 774 31.1
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 2.0e-66 258.1 768 33.9
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 5.9e-66 256.5 796 34.7
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.7e-65 255.0 796 34.2
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.9e-65 254.2 795 34.2
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 3.8e-65 253.8 787 33.0
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.1e-64 252.3 801 32.3
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 1.4e-64 251.9 768 31.6
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 7.2e-64 249.6 772 31.3
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 4.7e-63 246.9 661 33.0
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 2.0e-61 241.5 803 32.0
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 3.3e-61 240.7 808 33.0
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 3.7e-60 237.3 783 33.5
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.9e-56 224.9 909 28.5
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.5e-56 224.6 764 31.4
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 4.2e-56 223.8 781 32.5
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.2e-55 222.2 775 33.7
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 3.6e-55 220.7 777 32.4
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.1e-51 209.1 791 29.5
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.8e-51 208.4 944 27.5
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.9e-48 198.4 727 30.8
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 1.0e-46 192.6 746 29.2
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 4.0e-46 190.7 748 29.8
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 6.8e-46 189.9 777 30.1
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.6e-45 188.0 779 29.7
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 3.4e-45 187.6 779 29.9
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 5.4e-43 180.3 784 30.0
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 1.2e-42 179.1 732 28.0
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.0e-42 178.3 749 29.8
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 5.0e-41 173.7 773 29.0
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 1.5e-40 172.2 789 29.4
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.5e-40 172.2 779 29.4
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.9e-40 171.8 793 28.4
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 3.6e-39 167.5 754 28.4
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.2e-37 162.5 732 28.3
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.0e-37 161.8 711 29.8
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 3.4e-37 161.0 781 29.3
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 7.5e-37 159.8 306 41.2
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 7.5e-37 159.8 791 28.2
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 2.8e-36 157.9 731 28.5
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 8.3e-36 156.4 742 28.6
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 5.4e-35 153.7 713 29.9
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.0e-33 149.4 787 28.5
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 1.7e-33 148.7 774 30.4
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 5.0e-33 147.1 793 29.9
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 6.6e-33 146.7 753 28.6
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 1.9e-32 145.2 785 27.5
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.6e-31 141.0 696 29.6
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.4e-30 139.0 668 28.0
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 4.0e-30 137.5 796 27.5
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 5.2e-30 137.1 727 27.9
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 8.9e-30 136.3 775 28.6
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.2e-29 136.0 725 26.6
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 7.5e-29 133.3 674 27.9
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 7.8e-26 123.2 703 28.4
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 5.6e-24 117.1 780 26.9
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 1.2e-23 115.9 670 27.8
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 2.1e-23 115.2 778 25.8
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.0e-23 113.2 783 26.6
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 8.0e-23 113.2 751 27.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.3e-22 111.7 599 28.7
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.3e-22 111.7 735 28.3
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 4.0e-22 110.9 805 25.1
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 6.8e-22 110.2 719 27.0
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 9.2e-19 99.8 781 25.2
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 3.5e-18 97.8 571 26.1
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 3.1e-14 84.7 703 26.7
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 1.2e-13 82.8 692 26.4
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 9.8e-13 79.7 710 25.4
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 1.7e-12 79.0 672 25.7
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.1e-11 76.3 694 26.8
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.1e-10 72.0 163 35.0
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 3.5e-10 71.2 650 25.4
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 8.6e-09 66.6 721 24.8
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 3.3e-08 64.7 713 24.3
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.4e-06 59.3 45 62.2


User provided reference genes

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