Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.2e-164 583.2 302 100.0
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.3e-160 569.7 302 98.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 5.6e-159 564.3 302 96.7
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 6.0e-153 544.3 302 92.7
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 6.6e-152 540.8 304 93.4
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.8e-149 532.7 302 90.7
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 3.4e-148 528.5 304 90.1
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 3.4e-148 528.5 304 90.1
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 3.4e-148 528.5 304 90.8
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 4.5e-148 528.1 303 91.4
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.9e-147 525.4 304 89.8
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.8e-142 508.8 310 86.5
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.4e-141 506.5 303 87.1
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 4.5e-140 501.5 303 86.1
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.0e-139 500.4 303 86.1
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 2.9e-139 498.8 303 86.5
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 6.1e-129 464.5 310 79.4
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 2.2e-118 429.5 313 72.5
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.4e-109 400.2 223 93.3
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 7.2e-98 361.3 221 87.8
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 3.4e-95 352.4 295 65.1
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 9.8e-95 350.9 314 61.5
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 3.7e-94 349.0 293 65.9
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 7.0e-93 344.7 246 71.5
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 9.1e-93 344.4 299 63.2
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 3.5e-92 342.4 215 78.1
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 7.7e-92 341.3 217 77.0
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.0e-91 340.9 280 64.6
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.3e-91 340.5 293 64.8
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.7e-91 340.1 274 66.8
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 3.8e-91 339.0 215 76.3
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.1e-90 337.4 300 62.0
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.1e-90 337.4 312 59.3
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.1e-90 337.4 268 64.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.1e-89 333.2 204 78.9
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 2.1e-89 333.2 237 71.7
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.7e-89 332.8 254 68.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.6e-89 332.4 291 63.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.6e-89 332.4 302 62.6
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 3.6e-89 332.4 298 59.7
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 3.6e-89 332.4 284 64.4
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 3.6e-89 332.4 300 60.3
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 6.1e-89 331.6 254 67.3
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.0e-88 330.9 291 62.5
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.4e-88 330.5 237 70.0
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.4e-88 330.5 291 62.9
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.0e-88 328.9 241 68.0
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 4.0e-88 328.9 235 70.6
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.8e-88 328.2 241 69.3
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.0e-87 326.6 245 67.8
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.6e-87 326.2 233 70.0
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 3.4e-87 325.9 209 77.0
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.7e-87 325.1 288 62.5
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 5.7e-87 325.1 232 70.7
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 9.8e-87 324.3 222 72.5
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.3e-86 323.9 250 66.8
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.7e-86 323.6 232 70.3
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.2e-86 323.2 310 59.4
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 4.9e-86 322.0 263 64.3
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.3e-86 321.6 281 62.6
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.1e-85 320.9 233 70.0
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.1e-85 320.9 268 62.7
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 5.4e-85 318.5 210 73.8
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 7.0e-85 318.2 199 76.4
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 2.7e-84 316.2 234 68.4
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 7.7e-84 314.7 220 71.4
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 5.0e-83 312.0 287 59.6
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 6.6e-83 311.6 291 61.5
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.5e-82 310.5 254 63.0
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.5e-82 310.5 300 58.0
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 4.2e-82 308.9 286 59.4
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 2.1e-81 306.6 199 74.9
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 3.6e-81 305.8 194 75.8
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.1e-81 305.1 286 58.4
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 8.0e-81 304.7 199 74.4
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 2.3e-80 303.1 208 72.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 8.9e-80 301.2 288 58.0
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 5.7e-79 298.5 292 58.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 9.8e-79 297.7 264 59.5
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.4e-77 293.1 223 65.5
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.4e-77 293.1 291 56.0
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 7.0e-77 291.6 204 68.6
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 7.8e-76 288.1 283 57.6
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.7e-75 287.0 220 65.0
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 2.1e-73 280.0 248 58.9
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-71 273.9 183 73.2
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 5.8e-71 271.9 288 53.5
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 4.9e-70 268.9 205 63.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 7.0e-69 265.0 275 53.8
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 3.5e-68 262.7 257 56.0
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 4.3e-66 255.8 177 69.5
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 9.5e-66 254.6 279 53.8
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.2e-65 254.2 172 72.7
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.4e-64 250.8 279 51.3
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 4.6e-60 235.7 255 51.0
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 2.3e-59 233.4 219 58.4
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.6e-55 219.9 233 53.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.3e-51 207.6 155 68.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 5.2e-48 195.7 211 51.2
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.6e-41 174.1 149 59.1
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.8e-40 170.6 199 44.2
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 3.0e-35 153.3 247 36.4
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.3e-34 149.4 103 68.0
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 6.2e-33 145.6 110 69.1
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.0e-32 142.9 91 74.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 5.3e-32 142.5 109 62.4
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.0e-31 140.6 81 77.8
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 7.1e-29 132.1 203 36.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.3e-26 122.9 182 43.4
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 5.3e-24 115.9 77 71.4
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.2e-23 114.8 91 60.4
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 3.2e-21 106.7 112 55.4
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.9e-18 97.4 68 66.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.7e-17 93.2 72 63.9
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.4e-16 90.5 71 67.6
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.9e-16 89.0 58 74.1
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.5e-15 87.8 60 66.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.5e-15 87.8 69 60.9
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.4e-08 63.9 149 32.2
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 5.3e-08 62.8 67 46.3


User provided reference genes

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