Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 7.2e-203 710.3 345 100.0
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 6.8e-185 650.6 333 95.5
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 7.8e-181 637.1 333 91.3
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 1.7e-180 636.0 333 92.2
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 3.4e-176 621.7 335 88.1
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 9.8e-176 620.2 333 88.6
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 9.2e-174 613.6 335 87.2
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 6.0e-173 610.9 335 86.9
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.3e-172 609.8 335 86.9
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 1.3e-172 609.8 335 86.9
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 7.3e-171 604.0 335 86.0
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 3.0e-156 555.4 332 79.5
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.7e-143 513.1 332 72.6
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 6.4e-143 511.1 343 71.7
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 1.4e-142 510.0 336 72.9
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 5.5e-142 508.1 340 70.6
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 7.1e-142 507.7 339 72.3
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 9.3e-142 507.3 338 70.7
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 9.3e-142 507.3 336 71.7
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 4.6e-141 505.0 338 71.0
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 1.3e-140 503.4 336 71.7
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 3.9e-140 501.9 334 70.1
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 6.7e-140 501.1 336 70.8
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 8.7e-140 500.7 342 69.9
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 7.4e-139 497.7 349 67.0
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 9.6e-139 497.3 335 72.2
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 3.7e-138 495.4 330 69.7
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 1.1e-137 493.8 337 70.3
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 1.4e-137 493.4 333 70.3
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 1.4e-137 493.4 343 67.6
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 2.0e-136 489.6 337 69.1
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 4.5e-136 488.4 335 68.7
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 7.6e-136 487.6 332 69.0
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 1.0e-135 487.3 332 69.3
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 1.0e-135 487.3 332 67.2
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 1.3e-135 486.9 339 68.4
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 2.9e-135 485.7 359 65.5
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 3.8e-135 485.3 332 70.2
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 4.9e-135 485.0 332 68.7
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 6.5e-135 484.6 347 66.6
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 6.5e-135 484.6 333 69.1
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 1.4e-134 483.4 349 66.5
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 1.4e-134 483.4 332 68.1
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 2.5e-134 482.6 343 68.2
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 7.1e-134 481.1 332 68.7
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.6e-133 479.9 333 68.5
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 3.5e-133 478.8 332 67.8
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 4.6e-133 478.4 339 67.3
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 6.0e-133 478.0 336 67.6
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 7.9e-133 477.6 332 67.5
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 7.9e-133 477.6 336 66.1
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 1.3e-132 476.9 339 66.4
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 6.7e-132 474.6 334 68.3
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 8.7e-132 474.2 349 65.3
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 1.1e-131 473.8 338 66.3
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 1.5e-131 473.4 338 68.0
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 2.5e-131 472.6 333 66.7
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 2.5e-131 472.6 332 66.9
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 2.1e-130 469.5 337 66.5
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 2.1e-130 469.5 341 64.5
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 2.8e-130 469.2 338 67.8
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 6.3e-130 468.0 342 67.0
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 8.2e-130 467.6 333 66.7
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 1.1e-129 467.2 339 65.8
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 1.1e-129 467.2 336 67.3
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 5.3e-129 464.9 309 73.1
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 6.9e-129 464.5 332 66.6
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 1.2e-128 463.8 342 66.4
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 3.4e-128 462.2 342 66.4
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 3.8e-127 458.8 343 64.1
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.2e-126 455.3 332 65.7
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 4.2e-126 455.3 333 66.1
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 9.3e-126 454.1 329 64.7
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 1.6e-125 453.4 347 62.8
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 2.1e-125 453.0 337 64.1
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 2.7e-125 452.6 341 64.2
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 7.9e-125 451.1 332 65.1
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 7.9e-125 451.1 301 70.8
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.3e-124 449.5 332 65.1
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 3.0e-124 449.1 329 64.7
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 5.1e-124 448.4 358 61.7
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.7e-123 444.9 332 64.2
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 7.4e-123 444.5 329 62.6
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 9.7e-123 444.1 329 64.1
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 1.1e-121 440.7 361 61.8
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 1.1e-121 440.7 336 64.9
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 4.1e-121 438.7 343 64.1
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 6.9e-121 438.0 342 62.6
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 1.7e-119 433.3 332 62.7
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 2.2e-119 433.0 332 63.0
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 2.2e-119 433.0 401 55.9
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 8.5e-119 431.0 329 63.8
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 2.5e-118 429.5 317 67.2
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 4.4e-115 418.7 334 62.0
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 4.1e-113 412.1 213 88.7
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 1.6e-109 400.2 260 68.1
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 2.1e-109 399.8 334 59.6
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 3.6e-109 399.1 319 61.4
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 2.6e-107 392.9 336 56.8
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.5e-102 376.3 311 60.8
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 7.2e-102 374.8 232 70.3
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 2.1e-101 373.2 345 52.8
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 2.0e-99 366.7 303 61.1
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 5.7e-99 365.2 278 65.5
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 4.8e-98 362.1 316 54.7
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 5.3e-97 358.6 213 72.8
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 1.2e-96 357.5 345 50.1
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 1.3e-95 354.0 331 51.7
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.2e-95 353.2 293 60.1
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 1.9e-94 350.1 333 53.8
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.5e-94 348.6 248 64.1
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 5.2e-92 342.0 337 51.6
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 2.0e-83 313.5 278 59.4
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 7.3e-78 295.0 184 68.5
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 5.8e-67 258.8 382 40.8
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 3.2e-57 226.5 349 39.0
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 1.9e-54 217.2 362 37.8
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 9.2e-49 198.4 249 47.4
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 7.8e-48 195.3 143 55.9
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.2e-43 181.4 121 78.5
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 7.1e-41 172.2 109 66.1
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.3e-39 167.9 134 61.9
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 8.7e-39 165.2 477 27.9
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 2.7e-24 117.1 163 49.7
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 8.7e-23 112.1 153 40.5
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 5.3e-12 76.3 55 58.2
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 3.8e-10 70.1 117 46.2
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 2.7e-08 63.9 41 65.9
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 6.1e-08 62.8 38 71.1


User provided reference genes

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