Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G24265 Arabidopsis thaliana HOM05D008164 ORTHO05D010222 6.7e-81 303.9 147 100.0
AL7G28990 Arabidopsis lyrata HOM05D008164 ORTHO05D010222 1.8e-62 242.7 146 86.3
Carub.0007s1679 Capsella rubella HOM05D008164 ORTHO05D010222 1.1e-54 216.9 174 70.1
CARHR231690 Cardamine hirsuta HOM05D008164 ORTHO05D010222 3.4e-53 211.8 143 76.9
Thhalv10026492m.g Eutrema salsugineum HOM05D008164 ORTHO05D010222 8.5e-52 207.2 147 69.4
BcaNung01134 Brassica carinata HOM05D008164 ORTHO05D010222 2.6e-45 185.7 150 70.7
Sp7g22250 Schrenkiella parvula HOM05D008164 ORTHO05D010222 4.5e-45 184.9 149 69.1
BraA01t01499Z Brassica rapa HOM05D008164 ORTHO05D010222 2.9e-44 182.2 151 70.9
BcaC09g50889 Brassica carinata HOM05D008164 ORTHO05D010222 3.8e-44 181.8 151 70.2
C01p19540 Brassica napus HOM05D008164 ORTHO05D010222 3.8e-44 181.8 151 70.2
A01p15590 Brassica napus HOM05D008164 ORTHO05D010222 5.0e-44 181.4 151 70.9
BolC1t01882H Brassica oleracea HOM05D008164 ORTHO05D010222 9.4e-43 177.2 151 69.5
BcaC09g50645 Brassica carinata HOM05D008164 ORTHO05D010222 9.7e-40 167.2 150 67.3
C01p22560 Brassica napus HOM05D008164 ORTHO05D010222 9.7e-40 167.2 150 67.3
BolC1t02189H Brassica oleracea HOM05D008164 ORTHO05D010222 9.7e-40 167.2 150 67.3
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 2.3e-17 92.8 152 39.5
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 3.0e-17 92.4 160 38.8
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 4.0e-17 92.0 159 36.5
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 1.2e-16 90.5 160 38.8
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 1.5e-16 90.1 160 40.0
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 9.2e-14 80.9 161 37.3
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 9.2e-14 80.9 150 32.7
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 2.7e-13 79.3 158 36.1
DCAR_003281 Daucus carota HOM05D008164 ORTHO05D010222 1.3e-12 77.0 154 35.1
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 1.3e-12 77.0 184 34.2
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 2.9e-12 75.9 163 34.4
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 2.9e-12 75.9 162 32.7
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 2.9e-12 75.9 162 32.7
PSO017G5192 Papaver somniferum HOM05D008164 ORTHO05D010222 1.1e-11 73.9 152 34.2
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 1.5e-11 73.6 175 35.4
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 7.3e-11 71.2 179 32.4
ATR0580G429 Amborella trichopoda HOM05D008164 ORTHO05D010222 2.1e-10 69.7 145 33.1
Prupe.1G585100 Prunus persica HOM05D008164 ORTHO05D010222 2.8e-10 69.3 181 32.6
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 1.0e-09 67.4 107 33.6
BcaC06g32892 Brassica carinata HOM05D008164 ORTHO05D010222 5.2e-09 65.1 70 54.3
Oeu043611.1 Olea europaea HOM05D008164 ORTHO05D010222 5.2e-09 65.1 166 30.1
Cpa.g.sc173.36 Carica papaya HOM05D008164 ORTHO05D010222 6.8e-09 64.7 150 34.7
Cpa.g.sc173.26 Carica papaya HOM05D008164 ORTHO05D010222 1.2e-08 63.9 149 34.9
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 3.4e-08 62.4 163 30.1
Cpa.g.sc173.30 Carica papaya HOM05D008164 ORTHO05D010222 1.3e-07 60.5 151 34.4
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 1.3e-07 60.5 152 32.9
PSO478G3084 Papaver somniferum HOM05D008164 ORTHO05D010222 6.4e-07 58.2 145 34.5
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 6.4e-07 58.2 154 30.5
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 4.1e-06 55.5 165 31.5


User provided reference genes

Program Settings