Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G23870 Arabidopsis thaliana HOM05D008938 ORTHO05D011105 5.2e-52 207.6 117 100.0
AL7G29490 Arabidopsis lyrata HOM05D008938 ORTHO05D011105 3.7e-50 201.4 117 96.6
CARHR231250 Cardamine hirsuta HOM05D008938 ORTHO05D011105 4.5e-48 194.5 117 85.5
Carub.0007s1726 Capsella rubella HOM05D008938 ORTHO05D011105 1.6e-45 186.0 118 90.7
Thhalv10027272m.g Eutrema salsugineum HOM05D008938 ORTHO05D011105 1.0e-44 183.3 117 81.2
BcaNung04084 Brassica carinata HOM05D008938 ORTHO05D011105 1.5e-43 179.5 115 83.5
Sp7g21820 Schrenkiella parvula HOM05D008938 ORTHO05D011105 5.7e-43 177.6 118 83.9
BcaNung01093 Brassica carinata HOM05D008938 ORTHO05D011105 3.7e-42 174.9 118 83.9
A03p54800 Brassica napus HOM05D008938 ORTHO05D011105 8.3e-42 173.7 115 84.3
BraA03t14547Z Brassica rapa HOM05D008938 ORTHO05D011105 8.3e-42 173.7 115 84.3
BcaNung04239 Brassica carinata HOM05D008938 ORTHO05D011105 1.4e-41 172.9 115 78.3
BolC7t45812H Brassica oleracea HOM05D008938 ORTHO05D011105 1.4e-41 172.9 115 84.3
BcaC09g50937 Brassica carinata HOM05D008938 ORTHO05D011105 1.8e-41 172.6 118 83.1
A01p15170 Brassica napus HOM05D008938 ORTHO05D011105 1.8e-41 172.6 118 83.1
C01p19100 Brassica napus HOM05D008938 ORTHO05D011105 1.8e-41 172.6 118 83.1
BraA01t01455Z Brassica rapa HOM05D008938 ORTHO05D011105 1.8e-41 172.6 118 83.1
C07p53160 Brassica napus HOM05D008938 ORTHO05D011105 5.4e-41 171.0 115 83.5
BolC1t01836H Brassica oleracea HOM05D008938 ORTHO05D011105 9.1e-41 170.2 118 82.2
BcaB03g12401 Brassica carinata HOM05D008938 ORTHO05D011105 1.0e-36 156.8 117 72.6
Aa31LG6G7080 Aethionema arabicum HOM05D008938 ORTHO05D011105 1.7e-34 149.4 118 76.3
BcaC01g00480 Brassica carinata HOM05D008938 ORTHO05D011105 1.1e-33 146.7 117 68.4
C03p80380 Brassica napus HOM05D008938 ORTHO05D011105 1.1e-33 146.7 117 68.4
BolC3t20286H Brassica oleracea HOM05D008938 ORTHO05D011105 1.1e-33 146.7 117 68.4
Thhalv10029078m.g Eutrema salsugineum HOM05D008938 ORTHO05D011105 1.5e-30 136.3 118 63.6
AT4G11020 Arabidopsis thaliana HOM05D008938 ORTHO05D011105 1.9e-30 136.0 117 65.8
A02p26410 Brassica napus HOM05D008938 ORTHO05D011105 8.0e-29 130.6 117 65.0
BraA02t07643Z Brassica rapa HOM05D008938 ORTHO05D011105 8.0e-29 130.6 117 65.0
Carub.0006s2978 Capsella rubella HOM05D008938 ORTHO05D011105 3.0e-28 128.6 120 61.7
BcaB05g23869 Brassica carinata HOM05D008938 ORTHO05D011105 3.4e-27 125.2 116 68.1
BolC2t10229H Brassica oleracea HOM05D008938 ORTHO05D011105 5.8e-27 124.4 117 70.1
Sp6g06440 Schrenkiella parvula HOM05D008938 ORTHO05D011105 5.8e-27 124.4 119 70.6
BcaC03g16377 Brassica carinata HOM05D008938 ORTHO05D011105 3.7e-26 121.7 117 69.2
C02p41970 Brassica napus HOM05D008938 ORTHO05D011105 3.7e-26 121.7 117 69.2
BraA08t34154Z Brassica rapa HOM05D008938 ORTHO05D011105 6.4e-26 120.9 117 59.8
A08p22030 Brassica napus HOM05D008938 ORTHO05D011105 7.0e-25 117.5 98 68.4
CARHR255590 Cardamine hirsuta HOM05D008938 ORTHO05D011105 7.0e-25 117.5 98 74.5
THA.LOC104815061 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 3.3e-22 108.6 113 53.1
THA.LOC104813365 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 9.5e-22 107.1 113 52.2
THA.LOC104815067 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 1.2e-16 90.1 109 55.0


User provided reference genes

Program Settings