Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 5.3e-71 271.2 164 100.0
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 5.2e-58 228.0 170 85.9
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 2.9e-40 169.1 175 69.1
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 2.3e-37 159.5 170 65.3
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 1.6e-35 153.3 163 64.4
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 1.6e-35 153.3 163 64.4
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 1.1e-34 150.6 165 63.6
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 3.1e-34 149.1 168 62.5
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 3.1e-34 149.1 168 62.5
Thhalv10026500m.g Eutrema salsugineum HOM05D008262 ORTHO05D010389 4.6e-30 135.2 147 68.0
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 5.2e-26 121.7 144 68.1
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 5.1e-21 105.1 117 60.7
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 1.7e-13 80.1 146 47.3
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.7e-13 80.1 143 44.1
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 2.3e-13 79.7 139 43.9
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 5.1e-13 78.6 104 48.1
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 2.5e-12 76.3 103 49.5
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 3.3e-12 75.9 157 40.8
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 4.3e-12 75.5 97 53.6
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 5.6e-12 75.1 164 40.9
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 5.6e-12 75.1 156 42.9
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 9.6e-12 74.3 134 42.5
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 1.2e-11 73.9 127 50.4
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 1.6e-11 73.6 130 44.6
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 3.6e-11 72.4 164 40.2
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 4.7e-11 72.0 138 41.3
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 4.7e-11 72.0 103 52.4
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 8.1e-11 71.2 136 39.7
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 1.1e-10 70.9 109 46.8
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 1.1e-10 70.9 109 46.8
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.4e-10 70.5 164 39.0
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 1.4e-10 70.5 110 44.5
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 1.8e-10 70.1 100 46.0
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 2.4e-10 69.7 64 62.5
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 1.2e-09 67.4 135 40.7
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 1.2e-09 67.4 139 38.1
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 2.0e-09 66.6 122 42.6
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 3.4e-09 65.9 88 48.9
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.4e-09 65.9 88 48.9
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 3.4e-09 65.9 111 45.9
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 3.4e-09 65.9 99 45.5
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 4.4e-09 65.5 130 44.6
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 4.4e-09 65.5 130 44.6
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.3e-08 63.9 105 43.8
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.7e-08 63.5 105 43.8
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 3.8e-08 62.4 130 40.8
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 4.9e-08 62.0 105 42.9
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 1.4e-07 60.5 130 42.3
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 7.1e-07 58.2 106 44.3
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 1.6e-06 57.0 138 36.2
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 1.6e-06 57.0 135 38.5
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 2.1e-06 56.6 104 45.2
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 3.5e-06 55.8 137 36.5
THA.LOC104813440 Tarenaya hassleriana HOM05D008262 ORTHO05D010389 6.0e-06 55.1 165 33.9


User provided reference genes

Program Settings