Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G22115 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 4.5e-45 184.1 87 100.0
AL7G31580 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 9.8e-40 166.4 87 87.4
C07p51580 Brassica napus HOM05D009869 ORTHO05D011947 4.4e-32 141.0 88 73.9
C07p51590 Brassica napus HOM05D009869 ORTHO05D011947 4.4e-32 141.0 88 73.9
A03p53320 Brassica napus HOM05D009869 ORTHO05D011947 7.5e-32 140.2 88 72.7
C07p51610 Brassica napus HOM05D009869 ORTHO05D011947 7.5e-32 140.2 88 72.7
BolC7t45656H Brassica oleracea HOM05D009869 ORTHO05D011947 1.9e-30 135.6 82 75.6
BraA03t14396Z Brassica rapa HOM05D009869 ORTHO05D011947 3.2e-30 134.8 82 74.4
A03p53290 Brassica napus HOM05D009869 ORTHO05D011947 6.0e-29 130.6 88 70.5
CARHR228920 Cardamine hirsuta HOM05D009869 ORTHO05D011947 3.0e-28 128.3 88 71.6
Carub.0007s1924 Capsella rubella HOM05D009869 ORTHO05D011947 7.3e-27 123.6 84 71.4
CARHR228930 Cardamine hirsuta HOM05D009869 ORTHO05D011947 1.2e-26 122.9 89 68.5
AL7G31602 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 2.1e-26 122.1 84 71.4
A01p13430 Brassica napus HOM05D009869 ORTHO05D011947 4.7e-26 120.9 88 62.5
Thhalv10026978m.g Eutrema salsugineum HOM05D009869 ORTHO05D011947 6.2e-26 120.6 82 69.5
Carub.0003s2552 Capsella rubella HOM05D009869 ORTHO05D011947 1.1e-25 119.8 82 72.0
C01p16230 Brassica napus HOM05D009869 ORTHO05D011947 1.4e-25 119.4 88 62.5
AT4G22105 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 1.8e-25 119.0 84 69.0
Carub.0006s2601 Capsella rubella HOM05D009869 ORTHO05D011947 1.8e-25 119.0 82 73.2
BolC1t01576H Brassica oleracea HOM05D009869 ORTHO05D011947 2.3e-25 118.6 88 62.5
Sp7g20250 Schrenkiella parvula HOM05D009869 ORTHO05D011947 2.3e-25 118.6 66 80.3
Carub.0007s1921 Capsella rubella HOM05D009869 ORTHO05D011947 9.9e-24 113.2 82 70.7
Carub.0007s1923 Capsella rubella HOM05D009869 ORTHO05D011947 9.9e-24 113.2 82 70.7
BolC3t20679H Brassica oleracea HOM05D009869 ORTHO05D011947 7.3e-19 97.1 85 58.8
A03p53280 Brassica napus HOM05D009869 ORTHO05D011947 5.4e-14 80.9 54 63.0
AL3G31350 Arabidopsis lyrata HOM05D011909 ORTHO05D014045 2.1e-10 68.9 95 40.0
Carub.0003s1791 Capsella rubella HOM05D011909 ORTHO05D014045 1.8e-09 65.9 89 41.6
AL1G26060 Arabidopsis lyrata HOM05D009882 ORTHO05D018440 1.2e-08 63.2 97 40.2
C05p47910 Brassica napus HOM05D011909 ORTHO05D014045 1.2e-08 63.2 88 40.9
Carub.0003s1788 Capsella rubella HOM05D011909 ORTHO05D014045 1.3e-07 59.7 88 38.6
AT5G45875 Arabidopsis thaliana HOM05D011909 ORTHO05D014045 1.7e-07 59.3 97 37.1
BraA05t21993Z Brassica rapa HOM05D011909 ORTHO05D014045 1.7e-07 59.3 71 43.7
Carub.0007s2735 Capsella rubella HOM05D010364 ORTHO05D012454 1.7e-07 59.3 89 37.1
A08p32050 Brassica napus HOM05D009882 ORTHO05D018440 3.8e-07 58.2 93 37.6
Carub.0001s1386 Capsella rubella HOM05D009882 ORTHO05D018440 4.9e-07 57.8 97 37.1
AT1G08695 Arabidopsis thaliana HOM05D012267 ORTHO05D014432 8.4e-07 57.0 94 33.0
BraA08t35126Z Brassica rapa HOM05D009882 ORTHO05D018440 8.4e-07 57.0 93 37.6
C08p16530 Brassica napus HOM05D009882 ORTHO05D018440 1.4e-06 56.2 93 37.6
Potri.009G162300 Populus trichocarpa HOM05D012769 ORTHO05D011556 1.4e-06 56.2 53 41.5
BolC3t14302H Brassica oleracea HOM05D009882 ORTHO05D014327 1.9e-06 55.8 74 43.2
BolC5t33503H Brassica oleracea HOM05D011909 ORTHO05D014045 1.9e-06 55.8 88 39.8
Aa31LG6G15980 Aethionema arabicum HOM05D009869 ORTHO05D011947 2.4e-06 55.5 89 40.4
C03p19130 Brassica napus HOM05D009882 ORTHO05D014327 2.4e-06 55.5 74 43.2
A01p36230 Brassica napus HOM05D011909 ORTHO05D014045 4.2e-06 54.7 85 36.5
BraA01t03698Z Brassica rapa HOM05D011909 ORTHO05D014045 4.2e-06 54.7 85 36.5
Thhalv10021829m.g Eutrema salsugineum HOM05D010364 ORTHO05D012454 4.2e-06 54.7 84 36.9
Carub.0003s1790 Capsella rubella HOM05D011909 ORTHO05D014045 5.4e-06 54.3 88 34.1


User provided reference genes

Program Settings