Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G22105 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 7.1e-46 186.8 88 100.0
AL7G31602 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 4.0e-41 171.0 88 89.8
Carub.0007s1924 Capsella rubella HOM05D009869 ORTHO05D011947 1.5e-35 152.5 88 76.1
AL7G31580 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 1.2e-29 132.9 86 73.3
A03p53320 Brassica napus HOM05D009869 ORTHO05D011947 1.2e-29 132.9 87 70.1
C07p51580 Brassica napus HOM05D009869 ORTHO05D011947 2.1e-29 132.1 87 70.1
C07p51610 Brassica napus HOM05D009869 ORTHO05D011947 3.5e-29 131.3 87 69.0
C07p51590 Brassica napus HOM05D009869 ORTHO05D011947 6.0e-29 130.6 87 69.0
BraA03t14396Z Brassica rapa HOM05D009869 ORTHO05D011947 8.7e-28 126.7 87 67.8
BolC7t45656H Brassica oleracea HOM05D009869 ORTHO05D011947 1.6e-26 122.5 83 68.7
A03p53290 Brassica napus HOM05D009869 ORTHO05D011947 2.1e-26 122.1 87 66.7
AT4G22115 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 8.2e-26 120.2 84 69.0
A01p13430 Brassica napus HOM05D009869 ORTHO05D011947 1.1e-25 119.8 84 66.7
Thhalv10026978m.g Eutrema salsugineum HOM05D009869 ORTHO05D011947 3.1e-25 118.2 84 69.0
C01p16230 Brassica napus HOM05D009869 ORTHO05D011947 1.2e-24 116.3 84 64.3
BolC1t01576H Brassica oleracea HOM05D009869 ORTHO05D011947 2.0e-24 115.5 84 64.3
CARHR228930 Cardamine hirsuta HOM05D009869 ORTHO05D011947 2.9e-23 111.7 86 64.0
Carub.0003s2552 Capsella rubella HOM05D009869 ORTHO05D011947 6.5e-23 110.5 84 61.9
CARHR228920 Cardamine hirsuta HOM05D009869 ORTHO05D011947 8.4e-23 110.2 86 62.8
Carub.0006s2601 Capsella rubella HOM05D009869 ORTHO05D011947 2.5e-22 108.6 84 63.1
Sp7g20250 Schrenkiella parvula HOM05D009869 ORTHO05D011947 1.2e-21 106.3 64 75.0
Carub.0007s1921 Capsella rubella HOM05D009869 ORTHO05D011947 4.6e-21 104.4 84 61.9
Carub.0007s1923 Capsella rubella HOM05D009869 ORTHO05D011947 4.6e-21 104.4 84 61.9
BolC3t20679H Brassica oleracea HOM05D009869 ORTHO05D011947 1.3e-18 96.3 85 61.2
A03p53280 Brassica napus HOM05D009869 ORTHO05D011947 4.6e-13 77.8 62 56.5
AL3G31350 Arabidopsis lyrata HOM05D011909 ORTHO05D014045 5.1e-12 74.3 89 41.6
Carub.0003s1791 Capsella rubella HOM05D011909 ORTHO05D014045 3.3e-11 71.6 89 43.8
Carub.0003s1788 Capsella rubella HOM05D011909 ORTHO05D014045 7.4e-11 70.5 89 42.7
AT5G45875 Arabidopsis thaliana HOM05D011909 ORTHO05D014045 5.3e-09 64.3 92 39.1
C05p47910 Brassica napus HOM05D011909 ORTHO05D014045 1.2e-08 63.2 89 38.2
AL1G26060 Arabidopsis lyrata HOM05D009882 ORTHO05D018440 2.6e-08 62.0 93 41.9
Carub.0003s1790 Capsella rubella HOM05D011909 ORTHO05D014045 4.5e-08 61.2 89 38.2
Aa31LG6G15980 Aethionema arabicum HOM05D009869 ORTHO05D011947 5.9e-08 60.8 86 43.0
Carub.0001s1386 Capsella rubella HOM05D009882 ORTHO05D018440 1.0e-07 60.1 92 39.1
BraA05t21993Z Brassica rapa HOM05D011909 ORTHO05D014045 1.3e-07 59.7 73 39.7
A01p36230 Brassica napus HOM05D011909 ORTHO05D014045 2.9e-07 58.5 86 38.4
BraA01t03698Z Brassica rapa HOM05D011909 ORTHO05D014045 2.9e-07 58.5 86 38.4
Thhalv10021830m.g Eutrema salsugineum HOM05D010364 ORTHO05D012454 3.8e-07 58.2 90 38.9
Carub.0007s2735 Capsella rubella HOM05D010364 ORTHO05D012454 6.5e-07 57.4 91 34.1
Carub.0007s0702 Capsella rubella HOM05D010364 ORTHO05D012454 2.5e-06 55.5 91 39.6
BolC5t33503H Brassica oleracea HOM05D011909 ORTHO05D014045 7.2e-06 53.9 89 36.0
BNapus_Darmor_BZH_scaffold_38p02410 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 92 35.9
BNapus_Darmor_BZH_scaffold_38p02430 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 92 35.9
BNapus_Darmor_BZH_scaffold_38p02450 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 92 35.9


User provided reference genes

Program Settings