Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 1.2e-152 543.1 267 100.0
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 7.0e-137 490.7 271 88.9
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 2.6e-136 488.8 273 87.9
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.0e-135 486.9 273 88.3
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 2.2e-135 485.7 272 88.6
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.6e-133 479.6 273 87.2
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 1.6e-133 479.6 273 86.4
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.6e-133 479.6 273 87.2
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.6e-133 479.6 273 86.4
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 7.0e-129 464.2 272 85.3
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 1.5e-123 446.4 269 84.8
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 3.9e-111 405.2 269 75.5
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 2.9e-106 389.0 268 70.1
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 7.0e-105 384.4 252 72.2
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 3.5e-104 382.1 252 71.4
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 3.0e-103 379.0 252 70.6
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 3.0e-103 379.0 252 70.6
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 3.9e-103 378.6 252 72.2
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 6.6e-103 377.9 252 71.8
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 9.5e-102 374.0 252 69.8
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 2.1e-101 372.9 252 70.2
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 3.6e-101 372.1 252 71.0
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 4.7e-101 371.7 252 69.4
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 6.8e-100 367.9 252 68.3
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 6.8e-100 367.9 252 68.3
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 2.0e-99 366.3 252 69.0
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 2.6e-99 365.9 246 70.7
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 2.6e-99 365.9 252 70.2
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 3.4e-99 365.5 252 68.3
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.7e-98 363.2 252 68.3
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 2.2e-98 362.8 252 68.7
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 4.9e-98 361.7 253 68.0
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 8.3e-98 360.9 252 67.9
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 1.4e-97 360.1 252 68.7
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 5.4e-97 358.2 252 67.9
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 5.4e-97 358.2 252 67.9
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 7.1e-97 357.8 253 68.0
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 9.2e-97 357.5 253 66.8
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 9.2e-97 357.5 252 67.1
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.2e-96 357.1 253 67.2
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 1.6e-96 356.7 253 67.6
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 1.6e-96 356.7 259 64.5
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 2.1e-96 356.3 256 67.6
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 3.5e-96 355.5 252 67.1
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 1.7e-95 353.2 252 66.7
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 2.3e-95 352.8 252 65.9
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 2.3e-95 352.8 253 65.2
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.5e-94 350.1 252 65.5
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 2.5e-94 349.4 254 66.1
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 5.6e-94 348.2 252 64.3
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 9.5e-94 347.4 252 65.1
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.2e-91 340.5 253 64.8
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 2.2e-90 336.3 252 64.3
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 2.2e-90 336.3 253 63.2
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 4.9e-90 335.1 254 62.6
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 6.4e-90 334.7 252 61.5
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 7.1e-89 331.3 249 63.5
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 3.5e-88 328.9 254 63.4
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 3.0e-87 325.9 252 61.1
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 1.1e-86 323.9 258 60.5
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 4.7e-85 318.5 252 59.1
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 6.2e-85 318.2 253 59.3
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.8e-84 316.6 252 58.7
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 5.8e-83 311.6 228 67.1
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 1.3e-79 300.4 252 60.7
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 3.9e-79 298.9 211 65.9
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 7.3e-78 294.7 223 64.6
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 9.6e-78 294.3 252 56.0
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 3.4e-75 285.8 242 56.2
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 4.5e-51 205.7 254 43.7
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 2.2e-50 203.4 171 59.6
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 3.8e-50 202.6 245 41.6
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 2.4e-44 183.3 252 39.3
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 5.5e-41 172.2 153 57.5
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 2.7e-32 143.3 271 32.1
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 2.4e-28 130.2 116 53.4
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 7.7e-27 125.2 110 53.6
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 2.5e-17 93.6 154 38.3


User provided reference genes

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