Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.0e-84 315.1 155 100.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 4.0e-68 261.5 155 85.8
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 6.8e-68 260.8 156 84.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.9e-65 252.7 150 84.7
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 3.2e-65 251.9 148 85.1
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 5.4e-65 251.1 157 81.5
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 5.4e-65 251.1 157 81.5
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 5.4e-65 251.1 155 84.5
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 7.0e-65 250.8 156 84.0
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 7.0e-65 250.8 156 84.0
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 2.1e-64 249.2 155 82.6
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 2.7e-64 248.8 156 83.3
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 3.5e-64 248.4 155 81.9
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.3e-63 246.5 155 84.5
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 3.9e-63 245.0 156 82.7
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 6.6e-63 244.2 155 81.3
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.9e-62 242.7 156 82.1
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.5e-54 216.5 109 97.2
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 2.7e-48 195.7 148 68.9
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 5.8e-43 177.9 155 63.2
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.3e-38 161.0 98 76.5
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 7.3e-38 161.0 98 76.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 9.6e-38 160.6 119 67.2
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 2.1e-37 159.5 93 80.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 2.8e-37 159.1 101 79.2
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.8e-37 159.1 134 62.7
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.8e-37 159.1 119 69.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.6e-37 158.7 98 75.5
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 4.8e-37 158.3 97 75.3
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.1e-36 157.1 108 71.3
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.1e-36 157.1 120 67.5
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.4e-36 156.8 92 80.4
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.4e-36 156.8 91 80.2
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.4e-36 156.8 143 58.0
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.4e-36 156.8 153 57.5
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 1.4e-36 156.8 93 78.5
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.4e-36 156.8 104 73.1
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.8e-36 156.4 115 68.7
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 3.1e-36 155.6 97 77.3
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 3.1e-36 155.6 129 62.8
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 4.0e-36 155.2 129 65.1
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 4.0e-36 155.2 93 78.5
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 5.3e-36 154.8 90 81.1
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 5.3e-36 154.8 93 80.6
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 6.9e-36 154.5 139 61.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 6.9e-36 154.5 115 68.7
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 6.9e-36 154.5 98 72.4
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 9.0e-36 154.1 145 57.9
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.2e-35 153.7 129 65.1
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.2e-35 153.7 88 81.8
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.5e-35 153.3 129 61.2
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 2.0e-35 152.9 93 78.5
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.6e-35 152.5 83 85.5
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.4e-35 152.1 142 60.6
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 3.4e-35 152.1 86 81.4
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.4e-35 152.1 94 77.7
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 4.5e-35 151.8 100 75.0
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 4.5e-35 151.8 83 84.3
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 7.6e-35 151.0 155 54.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 7.6e-35 151.0 157 52.9
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 7.6e-35 151.0 128 61.7
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 9.9e-35 150.6 101 72.3
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 9.9e-35 150.6 149 55.7
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.7e-34 149.8 155 54.2
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.7e-34 149.8 124 62.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.7e-34 149.8 99 70.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.7e-34 149.8 99 70.7
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.9e-34 149.1 109 67.9
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.9e-34 149.1 131 64.1
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 6.4e-34 147.9 112 69.6
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 1.1e-33 147.1 89 74.2
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.1e-33 147.1 150 56.0
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 2.4e-33 146.0 98 71.4
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.4e-33 146.0 98 71.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 3.2e-33 145.6 98 71.4
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 4.2e-33 145.2 81 81.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 5.4e-33 144.8 115 63.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 7.1e-33 144.4 85 77.6
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 9.3e-33 144.1 94 78.7
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-32 143.7 100 69.0
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.6e-32 143.3 99 65.7
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.6e-32 143.3 124 63.7
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 2.1e-32 142.9 83 80.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.1e-32 142.9 82 80.5
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.7e-32 142.5 99 65.7
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 2.7e-32 142.5 146 56.2
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 3.5e-32 142.1 81 81.5
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 4.6e-32 141.7 143 51.7
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 1.0e-31 140.6 80 80.0
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.5e-30 136.7 80 78.8
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 9.6e-30 134.0 102 74.5
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 9.6e-30 134.0 77 83.1
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.4e-28 130.2 71 81.7
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.3e-26 123.6 80 71.2
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 1.7e-26 123.2 107 59.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-25 120.2 68 77.9
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 7.1e-25 117.9 76 69.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.6e-24 116.7 83 71.1
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.3e-23 113.6 91 64.8
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.3e-22 109.0 101 59.4
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 4.3e-22 108.6 107 56.1
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 9.6e-22 107.5 85 62.4
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-19 100.5 115 52.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.6e-19 97.8 56 82.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.1e-14 84.0 69 68.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 6.9e-12 74.7 56 66.1


User provided reference genes

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