Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.0e-165 586.6 287 100.0
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.6e-163 579.3 287 98.6
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 8.0e-163 577.0 287 98.3
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 2.8e-160 568.5 287 96.2
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.3e-157 559.7 287 94.8
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.0e-157 557.8 288 94.1
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.9e-156 555.8 288 94.1
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.1e-155 552.4 289 93.8
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.3e-154 548.9 289 92.7
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 5.2e-154 547.7 287 92.0
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 6.5e-149 530.8 283 90.8
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.0e-146 523.5 273 93.8
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 2.0e-145 519.2 273 92.7
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 2.0e-145 519.2 273 92.7
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.6e-137 492.3 288 80.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 9.8e-137 490.3 285 82.1
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 8.3e-136 487.3 282 81.2
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 3.1e-135 485.3 282 80.9
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 5.4e-135 484.6 288 78.8
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 9.2e-135 483.8 288 78.1
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 9.2e-135 483.8 288 78.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 4.5e-134 481.5 282 79.8
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.5e-134 481.5 288 77.8
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.0e-133 480.3 284 79.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.3e-133 479.2 288 77.4
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 2.9e-133 478.8 284 79.6
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 3.8e-133 478.4 284 79.6
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 3.8e-133 478.4 284 79.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 8.6e-133 477.2 286 78.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.1e-132 476.9 284 79.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 5.6e-132 474.6 282 78.7
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 7.3e-132 474.2 284 76.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 7.3e-132 474.2 285 77.9
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.6e-131 473.0 286 77.6
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 8.0e-131 470.7 286 77.3
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 8.0e-131 470.7 286 76.9
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 2.3e-130 469.2 286 77.6
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 3.0e-130 468.8 288 75.3
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.0e-130 468.8 281 78.3
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 5.2e-130 468.0 284 77.1
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 5.8e-129 464.5 281 77.6
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.7e-128 463.0 283 77.4
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.7e-128 463.0 283 77.4
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.2e-128 462.6 283 77.4
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 2.9e-128 462.2 286 75.9
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 2.9e-128 462.2 283 77.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.7e-128 461.8 295 74.9
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 8.3e-128 460.7 288 75.3
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.4e-127 459.9 283 76.0
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 3.2e-127 458.8 271 80.1
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 5.4e-127 458.0 284 74.6
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 9.2e-127 457.2 288 75.7
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 2.7e-126 455.7 284 72.5
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.7e-126 455.7 278 77.0
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 2.7e-126 455.7 286 75.2
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.5e-126 455.3 291 74.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 3.5e-126 455.3 288 76.0
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.3e-125 452.6 286 73.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.3e-125 452.6 282 74.1
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.5e-124 449.9 281 75.8
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.3e-124 448.4 285 73.7
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 9.5e-124 447.2 284 72.2
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 9.5e-124 447.2 284 72.2
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 2.1e-123 446.0 285 73.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.8e-123 445.7 283 73.5
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 3.6e-123 445.3 285 74.0
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.7e-123 444.9 287 72.1
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 6.2e-123 444.5 308 70.1
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.1e-122 442.2 282 73.4
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.2e-121 440.3 287 71.1
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.6e-121 439.1 329 65.3
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.4e-121 438.3 284 74.6
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.3e-120 436.8 288 70.1
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.7e-120 436.4 287 72.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.7e-120 435.3 286 69.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.3e-120 434.1 282 72.7
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.1e-119 433.7 288 69.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.1e-119 433.7 280 71.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.4e-119 433.3 286 70.6
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.4e-119 433.3 285 70.9
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 6.0e-118 427.9 286 68.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.5e-116 423.3 289 69.9
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 4.3e-116 421.8 286 68.2
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.6e-115 419.9 276 70.7
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.8e-114 416.4 286 67.5
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.0e-113 412.9 280 67.9
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 5.8e-113 411.4 269 70.6
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.3e-112 410.2 281 67.6
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 3.0e-109 399.1 251 75.3
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.1e-107 392.9 265 69.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.7e-107 391.7 261 69.0
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 2.9e-104 382.5 278 63.7
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 5.4e-103 378.3 246 71.5
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.6e-102 375.2 285 62.1
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.1e-100 370.5 258 67.4
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 3.3e-100 369.0 280 64.3
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 5.4e-95 351.7 239 70.3
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.1e-93 345.1 213 75.6
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.7e-86 322.8 262 56.9
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.2e-73 280.8 259 49.0
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.5e-73 280.4 174 75.9
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 4.2e-71 272.3 253 50.6
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.9e-70 268.1 252 51.2
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.4e-68 261.5 259 49.0
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.3e-51 205.3 152 65.8
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.4e-47 194.1 253 40.3
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.2e-47 192.6 110 82.7
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.3e-43 181.0 304 39.5
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 4.8e-43 179.1 196 49.0
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.6e-41 174.1 102 76.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 8.0e-38 161.8 143 58.0
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.8e-34 150.6 94 71.3
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.5e-31 140.2 95 67.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 4.2e-31 139.4 87 73.6
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.8e-29 131.7 77 79.2
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 5.5e-23 112.5 72 75.0
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 3.6e-22 109.8 67 77.6
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 3.2e-10 70.1 40 75.0
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.2e-06 55.8 48 60.4


User provided reference genes

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