Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 9.6e-223 776.5 404 100.0
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.1e-213 746.5 404 95.3
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 5.9e-204 714.1 404 91.6
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 9.1e-197 690.3 404 89.4
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 6.5e-195 684.1 406 87.9
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 3.9e-192 674.9 404 88.4
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 1.0e-184 650.2 404 84.9
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 2.3e-184 649.0 404 84.4
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 3.3e-183 645.2 404 84.4
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 5.7e-183 644.4 404 83.9
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 1.3e-182 643.3 404 84.4
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 6.3e-182 641.0 404 84.2
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 2.1e-177 625.9 409 82.9
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 1.7e-155 553.1 407 73.2
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 7.3e-130 468.0 402 64.7
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 6.2e-129 464.9 396 63.4
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 6.2e-129 464.9 396 63.4
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 1.4e-128 463.8 397 63.2
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 2.4e-128 463.0 392 64.5
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 2.4e-128 463.0 382 64.4
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 5.2e-128 461.8 407 61.4
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 2.6e-127 459.5 396 63.1
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 3.4e-127 459.1 376 64.4
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 4.4e-127 458.8 394 62.2
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 9.9e-127 457.6 398 60.8
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 1.3e-126 457.2 399 62.2
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 1.7e-126 456.8 397 62.7
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 6.4e-126 454.9 401 61.3
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 8.4e-126 454.5 369 64.2
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 8.4e-126 454.5 369 64.2
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 8.4e-126 454.5 396 61.6
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 8.4e-126 454.5 387 61.5
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 1.9e-125 453.4 373 62.5
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.9e-125 453.4 374 62.8
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 4.2e-125 452.2 359 64.9
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 4.2e-125 452.2 369 65.3
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 9.3e-125 451.1 392 62.2
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 9.3e-125 451.1 391 59.8
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 1.6e-124 450.3 373 62.5
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 1.6e-124 450.3 391 61.4
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 2.7e-124 449.5 359 64.3
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 4.6e-124 448.7 356 64.3
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 6.0e-124 448.4 417 59.7
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 1.7e-123 446.8 397 59.9
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 1.7e-123 446.8 376 63.3
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 1.7e-123 446.8 358 65.1
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 3.0e-123 446.0 389 61.2
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 3.9e-123 445.7 367 63.2
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 5.1e-123 445.3 402 60.4
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 6.6e-123 444.9 399 60.7
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 1.5e-122 443.7 399 60.2
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 5.6e-122 441.8 358 64.0
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 9.6e-122 441.0 434 57.8
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 9.6e-122 441.0 392 61.5
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 9.6e-122 441.0 392 61.5
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 1.6e-121 440.3 363 63.6
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 2.1e-121 439.9 394 61.2
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 2.1e-121 439.9 376 62.8
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.8e-121 439.5 387 59.7
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.8e-121 439.5 387 59.7
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 3.6e-121 439.1 398 60.8
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 4.8e-121 438.7 391 61.6
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 8.1e-121 438.0 419 58.2
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 1.1e-120 437.6 368 63.9
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.4e-120 437.2 396 61.1
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.8e-120 436.8 392 60.5
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 3.1e-120 436.0 384 60.7
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 6.9e-120 434.9 392 60.2
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 6.9e-120 434.9 370 61.9
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 2.0e-119 433.3 401 57.6
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 2.6e-119 433.0 384 60.9
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 2.6e-119 433.0 382 61.3
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 5.8e-119 431.8 373 61.1
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.3e-118 430.6 402 59.5
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 1.3e-118 430.6 371 61.2
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 2.9e-118 429.5 392 61.0
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 2.9e-118 429.5 407 60.0
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 1.4e-117 427.2 369 61.0
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 1.4e-117 427.2 398 58.8
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 4.2e-117 425.6 387 57.4
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 5.4e-117 425.2 418 56.0
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 2.7e-116 422.9 390 57.9
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 2.7e-116 422.9 287 72.5
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 7.9e-116 421.4 287 72.8
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 1.8e-115 420.2 383 59.5
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 3.0e-115 419.5 383 60.3
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.1e-114 417.5 363 60.3
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 3.3e-114 416.0 287 71.8
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 4.3e-114 415.6 388 57.0
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 5.6e-114 415.2 403 58.8
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 9.6e-114 414.5 407 55.8
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 3.7e-113 412.5 394 58.1
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 8.1e-113 411.4 348 61.2
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 1.4e-112 410.6 361 61.8
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 6.9e-112 408.3 387 56.6
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 1.2e-111 407.5 405 57.3
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 5.8e-111 405.2 398 54.5
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 2.9e-110 402.9 311 65.6
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 4.2e-109 399.1 375 57.3
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 7.1e-109 398.3 414 54.6
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 2.1e-108 396.7 394 56.6
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 4.6e-108 395.6 392 55.9
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 6.0e-108 395.2 395 54.9
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 7.9e-108 394.8 388 57.0
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 7.9e-108 394.8 357 59.1
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 3.9e-107 392.5 370 58.9
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 3.9e-107 392.5 370 58.9
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 6.7e-107 391.7 376 57.2
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 6.7e-107 391.7 398 54.3
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 8.7e-107 391.3 370 58.6
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 8.7e-107 391.3 370 58.6
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.1e-106 391.0 373 57.1
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 1.9e-106 390.2 393 57.0
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 2.5e-106 389.8 361 57.3
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 4.3e-106 389.0 379 58.0
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 7.4e-106 388.3 379 57.8
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 1.6e-105 387.1 370 58.1
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.6e-105 387.1 370 57.8
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 3.7e-105 386.0 379 57.5
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 8.2e-105 384.8 286 67.8
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 1.1e-104 384.4 376 57.2
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 3.4e-103 379.4 369 57.2
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 7.6e-103 378.3 372 56.2
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 1.7e-102 377.1 358 56.7
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 3.8e-102 375.9 371 52.6
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 6.5e-102 375.2 366 56.3
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 1.2e-100 370.9 365 54.0
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 1.2e-100 370.9 360 56.9
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 3.5e-100 369.4 290 60.3
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 2.5e-98 363.2 414 50.5
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 1.8e-96 357.1 372 54.6
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 5.1e-91 339.0 285 62.5
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 2.5e-90 336.7 287 62.0
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 8.2e-89 331.6 402 47.5
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 4.1e-88 329.3 373 49.6
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 2.5e-85 320.1 352 49.4
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 5.5e-85 318.9 251 65.3
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 6.7e-83 312.0 247 63.2
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 1.2e-66 258.1 210 61.9
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 2.8e-57 226.9 287 40.8
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 2.7e-55 220.3 396 37.1
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 2.8e-52 210.3 171 63.2
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 8.0e-52 208.8 155 66.5
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 1.4e-40 171.4 256 41.0
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 4.3e-29 133.3 246 36.6
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 3.7e-25 120.2 189 40.2
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 1.6e-23 114.8 174 41.4
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 1.6e-20 104.8 111 54.1
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 1.8e-19 101.3 281 27.8
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 4.0e-19 100.1 147 46.3
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 2.1e-15 87.8 53 77.4
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 1.0e-14 85.5 72 58.3
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 7.1e-08 62.8 144 34.0


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