Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G21020 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 5.1e-55 218.8 267 100.0
Carub.0007s2042 Capsella rubella HOM05D008952 ORTHO05D011481 4.2e-41 172.6 267 81.3
AL7G33130 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 7.2e-41 171.8 268 89.6
Thhalv10027342m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 9.1e-36 154.8 270 77.8
Sp7g19070 Schrenkiella parvula HOM05D008952 ORTHO05D011481 6.1e-32 142.1 270 79.6
BcaNung04710 Brassica carinata HOM05D008952 ORTHO05D011481 5.1e-31 139.0 270 74.8
A08p15360 Brassica napus HOM05D008952 ORTHO05D011481 8.8e-31 138.3 271 77.5
A01p12370 Brassica napus HOM05D008952 ORTHO05D011481 1.1e-30 137.9 270 82.2
CARHR227600 Cardamine hirsuta HOM05D008952 ORTHO05D011481 3.1e-28 129.8 267 63.7
BcaC09g51279 Brassica carinata HOM05D008952 ORTHO05D011481 1.6e-27 127.5 89 75.3
C01p14890 Brassica napus HOM05D008952 ORTHO05D011481 1.6e-27 127.5 89 75.3
BolC1t01436H Brassica oleracea HOM05D008952 ORTHO05D011481 1.6e-27 127.5 89 75.3
C03p83630 Brassica napus HOM05D008952 ORTHO05D011481 2.0e-27 127.1 91 74.7
BcaC01g00723 Brassica carinata HOM05D008952 ORTHO05D011481 1.0e-26 124.8 91 73.6
BraA01t01182Z Brassica rapa HOM05D008952 ORTHO05D011481 2.9e-26 123.2 270 78.9
BcaB03g11704 Brassica carinata HOM05D008952 ORTHO05D011481 1.6e-24 117.5 300 75.0
Aa31LG6G3060 Aethionema arabicum HOM05D008952 ORTHO05D011481 9.1e-20 101.7 88 61.4
AT5G44310 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 1.9e-17 94.0 89 62.9
Carub.0008s0421 Capsella rubella HOM05D008952 ORTHO05D011481 7.2e-17 92.0 86 62.8
AL8G15670 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 3.6e-16 89.7 84 64.3
CARHR178870 Cardamine hirsuta HOM05D008952 ORTHO05D011481 8.0e-16 88.6 86 61.6
Thhalv10003385m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 1.0e-15 88.2 92 59.8
THA.LOC104824877 Tarenaya hassleriana HOM05D008952 ORTHO05D011481 9.8e-14 81.6 112 48.2
Sp2g09140 Schrenkiella parvula HOM05D008952 ORTHO05D011481 1.1e-12 78.2 87 59.8
BraA09t37703Z Brassica rapa HOM05D008952 ORTHO05D011481 1.3e-10 71.2 86 55.8
BcaC04g21842 Brassica carinata HOM05D008952 ORTHO05D011481 1.7e-10 70.9 92 53.3
BcaB07g30953 Brassica carinata HOM05D008952 ORTHO05D011481 2.9e-10 70.1 86 55.8
A09p21040 Brassica napus HOM05D008952 ORTHO05D011481 5.0e-10 69.3 86 55.8
Aa31LG9G8860 Aethionema arabicum HOM05D000051 ORTHO05D000015 8.5e-10 68.6 84 50.0
C09p26780 Brassica napus HOM05D008952 ORTHO05D011481 8.5e-10 68.6 87 51.7
BolC9t55566H Brassica oleracea HOM05D008952 ORTHO05D011481 8.5e-10 68.6 87 51.7
BcaB07g30533 Brassica carinata HOM05D008952 ORTHO05D011481 7.2e-09 65.5 79 57.0
C02p44920 Brassica napus HOM05D008952 ORTHO05D021944 2.7e-08 63.5 92 50.0
A02p28340 Brassica napus HOM05D008952 ORTHO05D021944 5.2e-07 59.3 74 54.1
BraA02t07870Z Brassica rapa HOM05D008952 ORTHO05D021944 5.2e-07 59.3 74 54.1
MD00G1115300 Malus domestica HOM05D010174 ORTHO05D011264 1.2e-06 58.2 87 39.1
CARHR036340 Cardamine hirsuta HOM05D008952 ORTHO05D011481 1.5e-06 57.8 61 54.1
PGR004G0293 Punica granatum HOM05D032138 ORTHO05D011264 7.5e-06 55.5 91 41.8


User provided reference genes

Program Settings