Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G19985 Arabidopsis thaliana HOM05D007521 ORTHO05D009387 9.0e-96 353.6 181 100.0
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 2.9e-78 295.4 174 89.1
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 2.6e-71 272.3 174 80.5
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 1.8e-67 259.6 183 76.0
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 4.2e-61 238.4 184 70.7
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 2.1e-60 236.1 179 73.7
Thhalv10026093m.g Eutrema salsugineum HOM05D007521 ORTHO05D009387 1.8e-59 233.0 196 67.3
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 5.2e-59 231.5 169 74.0
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 7.5e-58 227.6 169 72.8
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 4.8e-57 224.9 170 68.2
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 4.8e-57 224.9 170 68.2
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 5.0e-54 214.9 175 70.3
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 5.0e-46 188.3 195 57.4
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 3.9e-38 162.2 188 53.2
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 4.6e-31 138.7 179 45.3
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 4.6e-31 138.7 176 44.9
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 6.0e-31 138.3 176 44.9
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 7.8e-31 137.9 176 44.3
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 3.9e-30 135.6 183 42.1
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 2.5e-29 132.9 177 46.3
COL.COLO4_19497 Corchorus olitorius HOM05D007521 ORTHO05D009387 4.3e-29 132.1 173 44.5
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 2.8e-28 129.4 190 46.8
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 1.8e-27 126.7 174 44.3
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 2.3e-27 126.3 187 43.9
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 5.2e-27 125.2 175 44.6
Cfa001178 Carpinus fangiana HOM05D007521 ORTHO05D009387 8.9e-27 124.4 170 48.2
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 2.6e-26 122.9 180 46.7
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 1.7e-25 120.2 169 44.4
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 6.4e-25 118.2 175 42.3
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 9.2e-24 114.4 168 46.4
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 7.8e-23 111.3 172 41.9
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 1.3e-22 110.5 179 40.8
Manes.10G004400 Manihot esculenta HOM05D007521 ORTHO05D009387 2.3e-22 109.8 172 44.2
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 2.3e-22 109.8 139 48.9
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 3.0e-22 109.4 181 39.8
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 3.9e-22 109.0 166 41.6
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.9e-22 109.0 158 45.6
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 3.9e-22 109.0 174 43.1
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 1.1e-21 107.5 191 39.8
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 1.5e-21 107.1 152 44.1
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 1.9e-21 106.7 175 38.3
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 1.9e-21 106.7 139 43.9
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 1.9e-21 106.7 190 40.0
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 2.5e-21 106.3 138 47.8
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 2.5e-21 106.3 140 47.1
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 3.3e-21 105.9 179 40.2
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 4.3e-21 105.5 140 48.6
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 5.6e-21 105.1 183 39.9
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 9.5e-21 104.4 144 45.8
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 1.2e-20 104.0 168 41.7
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 1.2e-20 104.0 181 38.7
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 1.6e-20 103.6 182 39.0
Oeu001369.2 Olea europaea HOM05D007521 ORTHO05D009387 2.1e-20 103.2 138 43.5
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 2.1e-20 103.2 139 46.8
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 3.6e-20 102.4 167 41.3
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 1.1e-19 100.9 155 41.9
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 1.4e-19 100.5 144 44.4
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.8e-19 100.1 143 43.4
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 3.1e-19 99.4 166 42.8
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 4.0e-19 99.0 168 41.7
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 4.0e-19 99.0 168 39.3
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 5.2e-19 98.6 138 44.2
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 6.8e-19 98.2 144 43.1
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 8.9e-19 97.8 168 41.7
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 1.2e-18 97.4 140 42.9
Sopen05g030700 Solanum pennellii HOM05D007521 ORTHO05D009387 1.2e-18 97.4 153 41.2
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 2.6e-18 96.3 153 41.2
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 3.4e-18 95.9 144 41.0
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 9.9e-18 94.4 140 42.9
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 1.3e-17 94.0 178 37.1
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 2.9e-17 92.8 143 44.1
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 3.7e-17 92.4 138 41.3
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 3.7e-17 92.4 165 39.4
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 4.9e-17 92.0 140 45.0
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 4.9e-17 92.0 154 38.3
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 1.0e-14 84.3 143 40.6
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 8.6e-14 81.3 149 38.9
Hund13426 Selenicereus undatus HOM05D007521 ORTHO05D009387 2.5e-13 79.7 166 33.7
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 7.3e-13 78.2 143 35.7
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 1.2e-12 77.4 147 35.4
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 4.7e-12 75.5 144 40.3
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 6.8e-11 71.6 138 40.6
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.2e-10 70.9 152 35.5
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 1.5e-10 70.5 138 36.2
Actinidia01020 Actinidia chinensis HOM05D007521 ORTHO05D009387 2.0e-10 70.1 96 46.9
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 3.4e-10 69.3 139 38.1
Hma1.2p1_0264F.1_g105790 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.8e-09 65.9 119 41.2
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 4.9e-09 65.5 97 45.4
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 4.2e-08 62.4 153 35.3
Hma1.2p1_0264F.1_g105780 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 9.3e-08 61.2 39 69.2
CDE04G1691 Ceratophyllum demersum HOM05D000172 ORTHO05D000273 1.2e-07 60.8 92 43.5


User provided reference genes

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