Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 5.4e-112 409.5 702 100.0
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.4e-88 331.6 701 94.0
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 7.3e-85 319.3 702 92.7
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 4.7e-84 316.6 702 92.7
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 2.4e-83 314.3 702 92.6
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 5.2e-83 313.2 701 92.6
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 5.2e-83 313.2 701 92.6
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 8.9e-83 312.4 701 92.4
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.9e-80 304.7 702 92.9
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 4.2e-80 303.5 674 96.3
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 4.2e-80 303.5 702 92.3
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.1e-77 295.4 674 92.0
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 7.6e-66 256.1 678 89.1
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 2.0e-58 231.5 705 86.5
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.1e-48 199.1 162 64.8
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 5.7e-45 186.8 169 61.5
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 2.2e-44 184.9 170 60.0
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.1e-43 182.6 198 54.0
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 4.1e-43 180.6 158 60.1
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.3e-41 175.6 169 56.8
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 3.8e-41 174.1 147 59.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 3.8e-41 174.1 175 55.4
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 3.8e-41 174.1 663 85.2
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 6.5e-41 173.3 714 74.9
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 2.5e-40 171.4 150 62.7
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 4.2e-40 170.6 184 52.2
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 3.6e-39 167.5 189 47.1
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 7.9e-39 166.4 151 59.6
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 7.9e-39 166.4 151 59.6
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.8e-38 165.2 173 54.9
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 2.3e-38 164.9 693 80.4
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 3.0e-38 164.5 715 78.6
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 3.9e-38 164.1 177 52.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.7e-38 163.3 157 56.1
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 6.7e-38 163.3 172 54.1
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.1e-37 162.5 180 52.8
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.1e-37 162.5 124 64.5
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 2.0e-37 161.8 184 50.5
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 2.5e-37 161.4 180 52.8
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 4.3e-37 160.6 167 53.9
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 5.7e-37 160.2 156 59.6
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 5.7e-37 160.2 137 59.9
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 5.7e-37 160.2 133 59.4
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 7.4e-37 159.8 130 60.0
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 9.7e-37 159.5 176 50.0
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 9.7e-37 159.5 173 52.6
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 2.8e-36 157.9 150 54.7
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 4.8e-36 157.1 185 51.4
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.8e-36 157.1 121 60.3
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.8e-35 155.2 184 47.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.4e-35 154.8 136 58.8
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.4e-35 154.8 133 56.4
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 3.1e-35 154.5 654 78.7
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 4.1e-35 154.1 156 55.1
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 6.9e-35 153.3 130 60.8
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 6.9e-35 153.3 166 51.2
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 9.1e-35 152.9 138 59.4
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.2e-34 152.5 654 78.6
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.5e-34 152.1 135 57.8
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.5e-34 152.1 121 59.5
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.5e-34 152.1 144 54.9
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 2.6e-34 151.4 139 55.4
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 3.4e-34 151.0 149 53.7
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.4e-34 151.0 140 57.1
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 3.4e-34 151.0 140 57.1
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 4.5e-34 150.6 719 80.1
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 4.5e-34 150.6 657 82.5
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 4.5e-34 150.6 657 82.5
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 5.9e-34 150.2 668 84.1
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 1.0e-33 149.4 145 54.5
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 1.3e-33 149.1 114 63.2
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.7e-33 148.7 149 53.7
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 3.8e-33 147.5 140 57.1
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 5.0e-33 147.1 123 60.2
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 8.5e-33 146.4 146 56.8
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.9e-32 145.2 153 52.9
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 4.2e-32 144.1 173 49.7
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.2e-31 142.5 135 57.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 6.1e-31 140.2 153 50.3
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 3.9e-30 137.5 143 51.7
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 3.9e-30 137.5 109 60.6
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 5.1e-30 137.1 154 50.6
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 6.7e-30 136.7 108 62.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 2.0e-29 135.2 92 70.7
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.3e-28 132.5 116 57.8
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.7e-28 132.1 165 46.7
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 6.3e-28 130.2 105 59.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 3.1e-27 127.9 161 43.5
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.0e-26 125.2 90 66.7
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 3.5e-26 124.4 82 81.7
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 3.5e-26 124.4 82 81.7
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 3.2e-24 117.9 85 68.2
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.2e-23 115.9 100 56.0
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.1e-23 115.2 158 42.4
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.7e-23 114.0 83 68.7
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 4.7e-23 114.0 105 52.4
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.3e-22 111.7 75 64.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 3.9e-22 110.9 69 85.5
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.0e-21 108.6 135 48.1
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 2.6e-21 108.2 83 65.1
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 4.4e-21 107.5 135 47.4
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.4e-19 102.4 178 38.8
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 3.1e-19 101.3 132 40.2
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.1e-19 100.9 75 57.3
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 5.3e-19 100.5 82 65.9
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 3.8e-17 94.4 157 40.1
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 4.7e-15 87.4 63 61.9
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 2.6e-13 81.6 58 69.0
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.8e-12 78.2 60 66.7
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.3e-11 73.9 50 74.0
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.2e-09 68.6 94 40.4
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.9e-09 68.2 127 33.1
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.9e-09 68.2 127 33.1
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 6.5e-09 67.0 94 38.3


User provided reference genes

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