Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 2.2e-94 349.0 181 100.0
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 3.3e-82 308.5 181 87.8
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 2.8e-73 278.9 181 79.6
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 2.2e-70 269.2 181 77.3
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 1.1e-66 256.9 181 73.5
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 2.7e-60 235.7 181 65.2
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 1.8e-59 233.0 181 65.2
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 1.2e-58 230.3 181 64.1
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 2.2e-57 226.1 181 63.5
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 8.3e-57 224.2 181 63.0
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.3e-54 216.9 181 63.0
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 1.4e-51 206.8 182 61.5
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 3.4e-50 202.2 178 60.1
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 4.1e-40 168.7 170 54.1
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 1.2e-39 167.2 177 52.5
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 2.0e-39 166.4 163 53.4
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 2.0e-39 166.4 170 50.0
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.7e-38 163.3 170 55.3
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 2.9e-38 162.5 111 75.7
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 7.3e-37 157.9 155 52.9
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 2.1e-36 156.4 159 53.5
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 2.8e-36 156.0 163 49.1
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 3.6e-36 155.6 177 46.9
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 8.0e-36 154.5 159 50.9
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 1.8e-35 153.3 163 50.3
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 2.3e-35 152.9 159 52.8
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 2.3e-35 152.9 159 52.2
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 4.0e-35 152.1 155 52.3
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 4.0e-35 152.1 170 51.8
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 4.0e-35 152.1 160 51.9
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 5.2e-35 151.8 159 52.2
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 1.5e-34 150.2 171 50.3
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 3.4e-34 149.1 175 48.0
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 4.4e-34 148.7 159 50.3
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 5.8e-34 148.3 166 48.8
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 7.5e-34 147.9 159 51.6
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 7.5e-34 147.9 160 50.6
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 9.8e-34 147.5 159 50.9
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 1.3e-33 147.1 163 49.7
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 1.3e-33 147.1 159 49.7
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.2e-33 146.4 156 49.4
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 2.9e-33 146.0 152 52.6
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 6.4e-33 144.8 159 48.4
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 8.3e-33 144.4 159 49.7
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 1.9e-32 143.3 159 50.3
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 2.4e-32 142.9 159 47.8
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 2.4e-32 142.9 162 48.8
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 3.2e-32 142.5 163 50.9
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 4.1e-32 142.1 159 49.7
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 9.2e-32 141.0 159 47.2
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 1.2e-31 140.6 159 45.9
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 2.0e-31 139.8 154 46.8
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 3.5e-31 139.0 154 46.8
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 3.5e-31 139.0 159 49.7
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 7.8e-31 137.9 158 47.5
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 1.3e-30 137.1 164 48.2
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 2.3e-30 136.3 164 44.5
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 3.0e-30 136.0 172 45.3
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 3.0e-30 136.0 153 45.8
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 3.9e-30 135.6 154 45.5
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 3.9e-30 135.6 172 45.3
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 6.6e-30 134.8 156 49.4
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 2.5e-29 132.9 152 46.1
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 9.5e-29 131.0 153 45.1
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 8.0e-28 127.9 154 43.5
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 1.1e-27 127.5 154 42.9
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 2.3e-27 126.3 157 44.6
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 3.1e-27 125.9 172 43.0
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 5.2e-27 125.2 164 41.5
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 8.9e-27 124.4 149 45.0
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 8.9e-27 124.4 159 44.0
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 2.6e-26 122.9 226 38.1
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 5.8e-26 121.7 162 43.2
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 2.9e-25 119.4 152 44.1
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 3.7e-25 119.0 158 43.0
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 3.7e-25 119.0 169 40.2
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 1.1e-24 117.5 151 45.0
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.4e-24 117.1 171 41.5
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.4e-24 117.1 159 42.1
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 9.2e-24 114.4 182 37.4
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 9.2e-24 114.4 163 40.5
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.6e-23 113.6 159 41.5
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 2.1e-23 113.2 173 41.6
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 4.6e-23 112.1 173 38.7
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.3e-22 110.5 185 40.0
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 7.3e-21 104.8 118 45.8
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 7.3e-21 104.8 185 40.0
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.6e-20 103.6 106 54.7
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 2.6e-18 96.3 151 38.4
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 8.3e-17 91.3 114 45.6
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 6.0e-15 85.1 91 49.5
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 3.0e-14 82.8 131 40.5
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 3.0e-14 82.8 78 56.4
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 5.1e-14 82.0 90 54.4
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 3.3e-13 79.3 84 53.6
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 6.2e-12 75.1 82 54.9
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 1.5e-10 70.5 70 54.3
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.7e-09 67.0 109 39.4
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 2.2e-09 66.6 101 42.6
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-08 62.4 68 51.5
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 7.1e-08 61.6 70 48.6
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 3.5e-07 59.3 142 28.2
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 1.7e-06 57.0 69 47.8


User provided reference genes

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