Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G18692 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.0e-34 149.4 73 100.0
AT3G53342 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.2e-33 146.0 73 97.3
AT1G55710 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.8e-31 138.7 73 93.2
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 2.0e-25 118.6 62 93.5
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 7.7e-22 106.7 62 91.9
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 8.6e-21 103.2 62 90.3
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 1.6e-19 99.0 62 85.5
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 7.5e-17 90.1 63 81.0
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 2.8e-16 88.2 62 79.0
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 4.1e-15 84.3 70 70.0
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-13 79.0 70 67.1
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 6.6e-13 77.0 65 70.8
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 1.5e-12 75.9 64 70.3
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 4.3e-12 74.3 63 71.4
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 1.2e-11 72.8 60 70.0
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.2e-11 72.8 68 64.7
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 2.1e-11 72.0 67 61.2
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 8.0e-11 70.1 62 67.7
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 1.0e-10 69.7 64 68.8
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 1.4e-10 69.3 62 66.1
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 3.1e-10 68.2 63 65.1
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 4.0e-10 67.8 66 63.6
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.2e-09 66.2 62 64.5
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 1.2e-09 66.2 62 64.5
BcaC08g44641 Brassica carinata HOM05D004429 ORTHO05D021447 3.4e-09 64.7 42 81.0
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 3.4e-09 64.7 68 63.2
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.7e-08 62.4 66 57.6
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 2.2e-08 62.0 63 65.1
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.2e-08 62.0 64 54.7
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.2e-08 62.0 64 54.7
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 6.4e-08 60.5 66 62.1
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 6.4e-08 60.5 66 62.1
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 1.1e-07 59.7 70 50.0
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 4.1e-07 57.8 60 55.0
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 5.4e-07 57.4 60 56.7
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 5.4e-07 57.4 69 50.7
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.2e-06 56.2 66 54.5
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 1.6e-06 55.8 63 58.7
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 1.6e-06 55.8 63 50.8
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 3.5e-06 54.7 67 49.3
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 3.5e-06 54.7 65 55.4
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 4.6e-06 54.3 69 50.7
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 7.8e-06 53.5 63 50.8


User provided reference genes

Program Settings