Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G18501 Arabidopsis thaliana HOM05D009818 ORTHO05D012173 2.4e-51 205.3 110 100.0
AL7G35780 Arabidopsis lyrata HOM05D009818 ORTHO05D012173 1.3e-41 172.9 113 86.7
CARHR225350 Cardamine hirsuta HOM05D009818 ORTHO05D012173 1.0e-33 146.7 115 73.9
C07p49750 Brassica napus HOM05D009818 ORTHO05D012173 3.0e-33 145.2 112 76.8
A03p51340 Brassica napus HOM05D009818 ORTHO05D012173 3.9e-33 144.8 112 76.8
BraA03t14216Z Brassica rapa HOM05D009818 ORTHO05D012173 3.9e-33 144.8 112 76.8
BcaNung02710 Brassica carinata HOM05D009818 ORTHO05D012173 1.5e-32 142.9 112 75.9
Sp7g15520 Schrenkiella parvula HOM05D009818 ORTHO05D012173 4.3e-32 141.4 115 74.8
BcaC06g30580 Brassica carinata HOM05D009818 ORTHO05D012173 5.6e-32 141.0 112 75.9
Carub.0007s2273 Capsella rubella HOM05D009818 ORTHO05D012173 1.6e-31 139.4 113 75.2
Thhalv10027250m.g Eutrema salsugineum HOM05D009818 ORTHO05D012173 2.4e-27 125.6 112 67.0
A01p10510 Brassica napus HOM05D009818 ORTHO05D012173 2.7e-26 122.1 104 66.3
BraA01t00997Z Brassica rapa HOM05D009818 ORTHO05D012173 3.0e-25 118.6 104 65.4
C03p81230 Brassica napus HOM05D009818 ORTHO05D012173 4.0e-22 108.2 113 65.5
A08p13820 Brassica napus HOM05D009818 ORTHO05D012173 2.6e-21 105.5 113 64.6
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 3.4e-21 105.1 104 61.5
BraA08t33361Z Brassica rapa HOM05D009818 ORTHO05D012173 3.4e-21 105.1 113 63.7
C01p12450 Brassica napus HOM05D009818 ORTHO05D012173 6.4e-20 100.9 110 54.5
BcaB04g18478 Brassica carinata HOM05D009818 ORTHO05D012173 1.9e-16 89.4 94 61.7
C01p12460 Brassica napus HOM05D009818 ORTHO05D012173 9.6e-16 87.0 79 65.8
BcaC09g51497 Brassica carinata HOM05D009818 ORTHO05D012173 3.6e-15 85.1 79 63.3
BraA01t00998Z Brassica rapa HOM05D009818 ORTHO05D012173 4.7e-15 84.7 79 64.6
BolC1t01219H Brassica oleracea HOM05D009818 ORTHO05D012173 1.7e-12 76.3 73 63.0
A01p10520 Brassica napus HOM05D009818 ORTHO05D012173 1.3e-07 60.1 55 63.6


User provided reference genes

Program Settings