Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G18070 Arabidopsis thaliana HOM05D010784 ORTHO05D012957 9.9e-108 393.7 229 100.0
AL7G36360 Arabidopsis lyrata HOM05D010784 ORTHO05D012957 1.1e-82 310.5 229 83.8
Carub.0007s2326 Capsella rubella HOM05D010784 ORTHO05D012957 2.9e-75 285.8 253 72.3
Sp7g16060 Schrenkiella parvula HOM05D010784 ORTHO05D012957 1.6e-65 253.4 256 66.0
Thhalv10025992m.g Eutrema salsugineum HOM05D010784 ORTHO05D012957 7.0e-53 211.5 255 60.0
CARHR224840 Cardamine hirsuta HOM05D010784 ORTHO05D012957 1.0e-51 207.6 250 61.2
BraA03t14188Z Brassica rapa HOM05D010784 ORTHO05D012957 1.8e-45 186.8 232 57.8
BolC8t48536H Brassica oleracea HOM05D010784 ORTHO05D012957 6.8e-40 168.3 222 55.9
BcaC07g38113 Brassica carinata HOM05D010784 ORTHO05D012957 3.4e-39 166.0 222 58.1
A03p57120 Brassica napus HOM05D010784 ORTHO05D012957 4.4e-39 165.6 163 55.8
C07p49450 Brassica napus HOM05D010784 ORTHO05D012957 2.2e-38 163.3 229 54.6
A08p13470 Brassica napus HOM05D010784 ORTHO05D012957 1.4e-37 160.6 215 57.2
BcaB04g18454 Brassica carinata HOM05D010784 ORTHO05D012957 1.2e-36 157.5 221 56.6
BolC7t45450H Brassica oleracea HOM05D010784 ORTHO05D012957 1.2e-36 157.5 228 53.9
BraA08t33324Z Brassica rapa HOM05D010784 ORTHO05D012957 1.7e-35 153.7 215 56.3
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 4.4e-31 139.0 203 55.2
Aa31LG6G810 Aethionema arabicum HOM05D010784 ORTHO05D012957 9.5e-26 121.3 174 48.3
THA.LOC104812838 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 1.3e-22 110.9 188 42.0
THA.LOC104806111 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 9.6e-18 94.7 119 47.9
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 3.4e-07 59.7 78 41.0
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 7.6e-07 58.5 145 31.0
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 7.6e-07 58.5 145 31.0
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 2.9e-06 56.6 97 34.0
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 3.8e-06 56.2 132 34.1
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 6.4e-06 55.5 138 28.3
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 8.4e-06 55.1 145 31.7
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 8.4e-06 55.1 175 26.9
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 8.4e-06 55.1 124 30.6


User provided reference genes

Program Settings