Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.6e-85 319.3 155 100.0
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 5.9e-80 300.8 155 94.8
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.9e-70 269.2 160 85.6
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 7.5e-67 257.3 161 82.0
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 2.2e-66 255.8 161 82.0
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 6.4e-66 254.2 161 81.4
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 7.0e-65 250.8 166 77.7
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 7.0e-65 250.8 161 80.1
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 2.1e-64 249.2 163 80.4
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 3.5e-64 248.4 161 79.5
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.0e-63 246.9 162 79.6
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.4e-60 236.5 159 76.1
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 1.7e-47 193.0 171 62.0
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.4e-44 183.3 155 63.9
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 6.4e-42 174.5 164 53.0
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 9.3e-41 170.6 157 55.4
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 9.3e-41 170.6 156 61.5
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 2.1e-40 169.5 156 54.5
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 2.7e-40 169.1 157 61.1
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 3.5e-40 168.7 159 61.0
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 3.5e-40 168.7 156 60.9
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 6.0e-40 167.9 157 60.5
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 1.0e-39 167.2 158 53.2
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.3e-39 166.8 159 53.5
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 1.7e-39 166.4 160 53.1
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 2.3e-39 166.0 158 53.8
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 3.0e-39 165.6 156 60.3
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 3.0e-39 165.6 156 60.3
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 3.0e-39 165.6 160 53.1
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 3.9e-39 165.2 157 59.9
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 3.9e-39 165.2 156 54.5
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 1.1e-38 163.7 154 53.9
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.5e-38 163.3 158 60.8
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 2.5e-38 162.5 158 52.5
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 5.6e-38 161.4 147 58.5
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 1.3e-37 160.2 160 51.2
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 3.6e-37 158.7 147 59.9
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 3.6e-37 158.7 155 51.0
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 3.6e-37 158.7 167 49.7
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 4.8e-37 158.3 153 58.8
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 4.8e-37 158.3 160 53.1
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 6.2e-37 157.9 155 51.0
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 8.1e-37 157.5 166 51.2
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 8.1e-37 157.5 166 51.2
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 1.1e-36 157.1 156 52.6
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 1.1e-36 157.1 151 57.6
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.1e-36 157.1 155 51.0
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 1.8e-36 156.4 153 58.2
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 1.8e-36 156.4 153 58.2
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 3.1e-36 155.6 157 52.2
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 4.0e-36 155.2 164 50.6
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 5.3e-36 154.8 157 51.6
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 5.3e-36 154.8 152 50.7
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 1.5e-35 153.3 158 51.9
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 2.0e-35 152.9 159 50.3
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.3e-34 150.2 154 55.8
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 1.7e-34 149.8 164 48.8
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 2.2e-34 149.4 154 49.4
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 2.9e-34 149.1 196 45.4
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 2.9e-34 149.1 157 49.0
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 8.4e-34 147.5 173 52.6
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 1.4e-33 146.7 161 47.8
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.9e-33 146.4 155 49.0
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 1.9e-33 146.4 170 47.1
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 1.9e-33 146.4 155 49.7
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 2.4e-33 146.0 156 50.0
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 2.4e-33 146.0 156 50.0
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 2.4e-33 146.0 154 49.4
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.2e-33 145.6 154 48.7
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 3.2e-33 145.6 153 49.0
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 9.3e-33 144.1 110 68.2
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 9.3e-33 144.1 157 49.0
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.2e-32 143.7 80 86.2
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.2e-32 143.7 154 47.4
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.2e-32 143.7 158 49.4
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.6e-32 143.3 157 49.7
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 1.6e-32 143.3 162 48.1
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 4.6e-32 141.7 164 46.3
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 7.9e-32 141.0 165 50.3
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.0e-31 140.6 164 45.7
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.3e-31 140.2 155 47.1
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 1.8e-31 139.8 159 50.3
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 1.8e-31 139.8 164 45.7
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.3e-31 139.4 155 45.8
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.9e-31 138.7 153 48.4
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 6.7e-31 137.9 156 46.2
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.9e-30 136.3 165 44.8
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.5e-30 136.0 153 47.7
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 2.5e-30 136.0 164 45.7
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 3.3e-30 135.6 157 49.7
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 4.3e-30 135.2 170 42.9
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 4.3e-30 135.2 141 48.9
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.3e-30 135.2 158 48.7
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 5.6e-30 134.8 166 44.6
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 5.6e-30 134.8 223 36.3
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 9.6e-30 134.0 158 46.2
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.1e-29 132.9 151 45.0
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 2.8e-29 132.5 161 47.2
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 4.8e-29 131.7 154 47.4
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 6.2e-29 131.3 162 45.1
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.4e-28 130.2 157 44.6
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.8e-28 129.8 158 42.4
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 3.1e-28 129.0 161 46.0
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 5.3e-28 128.3 163 47.2
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 5.3e-28 128.3 264 32.2
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 5.3e-28 128.3 155 45.2
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 5.3e-28 128.3 151 46.4
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 5.3e-28 128.3 152 44.1
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 1.5e-27 126.7 154 49.4
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.5e-27 126.7 156 46.2
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 1.5e-27 126.7 157 45.2
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 3.4e-27 125.6 158 44.9
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 4.5e-27 125.2 165 43.0
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 4.5e-27 125.2 157 43.3
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 4.5e-27 125.2 171 42.1
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 5.8e-27 124.8 158 43.7
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 5.8e-27 124.8 151 46.4
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 7.6e-27 124.4 153 43.1
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 7.6e-27 124.4 153 43.1
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 1.0e-26 124.0 188 39.9
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 3.8e-26 122.1 162 42.6
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 6.5e-26 121.3 160 43.8
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 8.4e-26 120.9 134 47.0
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 1.4e-25 120.2 242 34.3
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 1.9e-25 119.8 217 35.0
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 1.9e-25 119.8 189 38.6
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 2.5e-25 119.4 174 42.5
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 4.2e-25 118.6 161 42.2
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 9.3e-25 117.5 112 49.1
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 2.7e-24 115.9 157 42.0
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 3.5e-24 115.5 151 43.7
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 6.0e-24 114.8 164 44.5
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.0e-23 114.0 114 51.8
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 1.0e-23 114.0 198 36.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 5.7e-22 108.2 110 47.3
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 9.6e-22 107.5 153 39.2
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 9.6e-22 107.5 159 40.9
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 1.3e-21 107.1 154 43.5
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.1e-21 106.3 171 37.4
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 5.3e-20 101.7 169 35.5
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 4.5e-19 98.6 164 38.4
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 6.5e-18 94.7 145 39.3
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.1e-17 94.0 82 51.2
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.1e-14 84.0 76 48.7
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 1.5e-14 83.6 77 50.6
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.5e-14 83.6 77 51.9
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 5.7e-14 81.6 123 35.8
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 7.4e-14 81.3 75 52.0
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 4.8e-13 78.6 78 46.2
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.1e-12 77.4 81 51.9
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 6.9e-12 74.7 88 48.9
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 4.5e-11 72.0 143 36.4
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 3.8e-10 68.9 150 34.7
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 1.4e-09 67.0 86 40.7
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 3.2e-09 65.9 43 62.8
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.2e-08 63.9 89 39.3
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 8.8e-07 57.8 72 45.8


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