Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 3.4e-145 518.5 295 100.0
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 3.7e-131 471.9 291 92.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 3.0e-117 425.6 288 86.8
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.6e-116 422.5 278 87.8
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 3.7e-115 418.7 297 82.8
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.4e-114 416.8 287 84.7
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 4.1e-114 415.2 291 85.6
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 1.6e-113 413.3 287 84.0
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 3.5e-113 412.1 286 84.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 2.9e-112 409.1 287 84.3
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 6.6e-112 407.9 287 84.3
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 7.3e-103 377.9 230 93.5
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.4e-77 293.1 292 63.4
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 5.1e-72 275.4 288 62.8
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.2e-58 229.2 307 50.2
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 5.5e-58 228.8 307 50.2
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.8e-56 223.8 320 49.7
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 6.7e-56 221.9 307 49.5
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.9e-55 220.3 306 48.7
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 2.1e-54 216.9 315 46.7
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 4.8e-54 215.7 322 47.8
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 6.2e-54 215.3 311 46.9
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.4e-53 214.2 292 47.3
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.4e-53 213.4 331 45.9
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 7.6e-52 208.4 312 46.5
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.7e-51 207.2 308 47.7
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 2.2e-51 206.8 289 49.8
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 4.9e-51 205.7 298 48.0
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 4.9e-51 205.7 310 46.8
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 4.9e-51 205.7 305 46.9
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 8.4e-51 204.9 320 44.7
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 7.1e-50 201.8 311 47.3
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.6e-49 200.7 284 48.6
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.7e-49 199.9 295 47.5
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 3.5e-49 199.5 303 45.9
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.1e-49 198.7 311 46.9
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 7.9e-49 198.4 310 44.8
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 2.3e-48 196.8 316 45.3
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.3e-48 196.8 302 46.4
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 2.3e-48 196.8 315 47.0
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 3.9e-48 196.1 316 44.3
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.1e-47 194.5 314 45.5
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 1.1e-47 194.5 297 46.1
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.1e-47 194.5 313 44.1
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.5e-47 194.1 310 43.9
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.5e-47 194.1 286 46.9
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.9e-47 193.7 312 46.5
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.9e-47 193.7 297 46.5
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.5e-47 193.4 318 45.6
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 4.3e-47 192.6 298 45.6
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 5.7e-47 192.2 289 47.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.3e-46 191.0 290 47.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.6e-46 190.7 288 45.5
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.6e-46 190.7 324 44.4
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 4.8e-46 189.1 310 45.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.3e-46 188.7 311 45.3
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.8e-45 187.2 304 45.7
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.1e-45 186.4 282 46.8
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 9.0e-45 184.9 294 43.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.2e-44 184.5 286 44.8
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 2.6e-44 183.3 308 45.1
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 3.4e-44 183.0 309 44.0
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 3.4e-44 183.0 295 44.4
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.7e-43 180.6 299 43.8
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 5.5e-42 175.6 275 46.5
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 2.7e-41 173.3 271 46.5
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 1.0e-40 171.4 253 47.8
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 6.7e-40 168.7 295 44.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 4.3e-39 166.0 289 42.9
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 1.4e-37 161.0 286 40.6
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.4e-37 160.2 250 42.0
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 9.1e-37 158.3 330 40.6
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.2e-36 157.9 250 38.8
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 1.2e-36 157.9 285 43.9
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.8e-35 152.9 295 40.3
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 6.5e-35 152.1 272 43.0
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.4e-34 151.0 258 41.1
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.5e-34 150.2 250 40.8
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 2.5e-34 150.2 253 43.9
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 7.2e-34 148.7 340 37.6
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 7.2e-34 148.7 340 37.6
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.0e-32 144.8 238 45.0
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.0e-32 143.3 295 40.3
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 5.1e-32 142.5 284 41.5
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 6.7e-32 142.1 256 41.4
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.4e-29 134.4 318 39.3
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.8e-29 134.0 223 40.8
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.3e-29 132.5 276 38.8
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 7.0e-29 132.1 289 38.4
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 1.7e-27 127.5 236 42.8
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 8.5e-27 125.2 235 43.8
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.2e-26 123.2 241 38.2
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 9.4e-26 121.7 224 43.3
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 6.1e-25 119.0 224 43.8
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 6.1e-25 119.0 272 36.8
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 1.0e-24 118.2 258 38.4
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 3.5e-20 103.2 79 64.6
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 4.5e-20 102.8 151 43.0
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.2e-19 100.5 119 49.6
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 2.9e-19 100.1 134 45.5
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 2.7e-17 93.6 224 33.5
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.4e-16 91.3 219 35.2
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 3.0e-16 90.1 158 38.6
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 2.8e-14 83.6 294 31.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 5.3e-13 79.3 92 53.3
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 1.2e-12 78.2 124 47.6
BcaC03g14076 Brassica carinata HOM05D006859 ORTHO05D007990 3.5e-12 76.6 74 63.5
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 5.9e-12 75.9 172 35.5
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.6e-09 66.6 80 45.0
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.6e-07 60.5 261 32.2


User provided reference genes

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