Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 4.2e-96 354.8 186 100.0
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.6e-84 316.2 186 90.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 5.8e-82 307.8 178 91.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 5.6e-77 291.2 187 83.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.7e-76 288.5 187 82.9
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.0e-70 270.4 186 80.6
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.7e-63 245.7 187 74.3
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 7.9e-63 244.2 187 73.8
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 7.9e-63 244.2 187 73.8
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.0e-62 243.8 187 73.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 2.4e-51 206.1 185 66.5
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 9.4e-48 194.1 184 60.3
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.5e-37 160.2 135 63.0
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.0e-37 159.8 110 71.8
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 3.3e-37 159.1 136 58.8
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 5.7e-37 158.3 133 63.9
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.3e-36 157.1 108 74.1
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.3e-36 157.1 107 70.1
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.7e-36 156.8 108 71.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.7e-36 156.8 115 72.2
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.7e-36 156.8 128 60.9
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.7e-36 156.8 133 63.2
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.2e-36 156.4 108 73.1
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 2.2e-36 156.4 124 63.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.7e-36 155.6 197 48.7
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 3.7e-36 155.6 133 60.2
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.8e-36 155.2 125 63.2
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.8e-36 155.2 174 52.9
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 6.3e-36 154.8 141 60.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.3e-36 154.8 159 57.2
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 8.3e-36 154.5 111 70.3
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.3e-36 154.5 108 71.3
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.1e-35 154.1 108 69.4
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.1e-35 154.1 131 62.6
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.4e-35 153.7 105 73.3
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.4e-35 153.7 105 73.3
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.8e-35 153.3 150 54.0
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 2.4e-35 152.9 194 46.4
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.4e-35 152.9 108 72.2
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.1e-35 152.5 133 60.2
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.1e-35 152.5 133 60.2
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 3.1e-35 152.5 105 73.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 5.3e-35 151.8 101 74.3
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 5.3e-35 151.8 107 69.2
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 7.0e-35 151.4 124 73.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 9.1e-35 151.0 108 68.5
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 128 62.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 108 69.4
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.2e-34 150.6 108 69.4
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.2e-34 150.6 112 64.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 105 72.4
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.0e-34 149.8 105 69.5
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 3.5e-34 149.1 175 49.1
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 5.9e-34 148.3 108 66.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.9e-34 148.3 108 64.8
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.7e-33 146.7 108 63.9
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.7e-33 146.7 141 56.7
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.2e-33 146.4 108 63.9
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 2.9e-33 146.0 174 52.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.9e-33 146.0 108 63.9
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.8e-33 145.6 105 66.7
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 3.8e-33 145.6 108 65.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.8e-33 145.6 112 67.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 3.8e-33 145.6 106 62.3
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.1e-32 144.1 105 67.6
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.1e-32 144.1 179 49.2
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.5e-32 143.7 107 67.3
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.9e-32 143.3 103 68.0
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.9e-32 143.3 185 48.1
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.9e-32 143.3 108 63.9
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 1.9e-32 143.3 105 65.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 2.5e-32 142.9 153 50.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 5.5e-32 141.7 108 65.7
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 5.5e-32 141.7 95 74.7
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 9.4e-32 141.0 96 69.8
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.2e-31 140.6 96 71.9
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.6e-31 140.2 134 54.5
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.6e-31 139.0 109 66.1
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.6e-31 139.0 109 66.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 4.7e-31 138.7 201 45.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 8.0e-31 137.9 101 66.3
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 8.0e-31 137.9 107 65.4
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 8.0e-31 137.9 94 68.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 3.0e-30 136.0 105 61.9
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.0e-30 135.6 133 57.9
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 5.2e-30 135.2 109 62.4
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.8e-30 134.4 116 61.2
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.2e-29 134.0 108 55.6
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.5e-29 133.7 188 42.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 4.4e-29 132.1 184 42.4
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.8e-28 129.4 91 73.6
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.8e-27 126.7 72 86.1
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 7.0e-27 124.8 104 55.8
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.7e-26 122.9 104 53.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.3e-25 120.6 166 48.2
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.3e-25 119.8 145 42.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 2.9e-25 119.4 94 63.8
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.8e-25 119.0 94 61.7
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.2e-21 107.5 83 51.8
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 5.7e-21 105.1 184 41.8
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 3.7e-20 102.4 99 45.5
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 7.8e-18 94.7 75 57.3
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.3e-17 93.2 62 72.6
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-16 89.4 90 47.8
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.3e-12 77.4 107 43.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.3e-09 66.6 40 70.0
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.1e-06 57.8 44 63.6


User provided reference genes

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