Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G16162 Arabidopsis thaliana HOM05D000054 ORTHO05D002584 9.2e-61 237.3 177 100.0
BcaB06g25350 Brassica carinata HOM05D000054 ORTHO05D000171 4.5e-15 85.5 159 63.5
Lj8C146G14 Lonicera japonica HOM05D000054 ORTHO05D000171 2.9e-14 82.8 133 63.9
Ciclev10018908m.g Citrus clementina HOM05D000054 ORTHO05D000171 2.3e-11 73.2 158 56.3
Aa31LG8G2050 Aethionema arabicum HOM05D000054 ORTHO05D000171 6.7e-11 71.6 43 76.7
Manes.03G092000 Manihot esculenta HOM05D000054 ORTHO05D000171 1.9e-10 70.1 42 73.8
Phvul.005G078000 Phaseolus vulgaris HOM05D000054 ORTHO05D002584 2.5e-10 69.7 178 48.3
Lj3g0017133 Lotus japonicus HOM05D000054 ORTHO05D000171 4.3e-10 68.9 43 72.1
Phvul.005G077500 Phaseolus vulgaris HOM05D000054 ORTHO05D002584 9.7e-10 67.8 48 64.6
Manes.03G092416 Manihot esculenta HOM05D000054 ORTHO05D000171 2.2e-09 66.6 186 48.9
Nitab4.5_0008572g0050 Nicotiana tabacum HOM05D000054 ORTHO05D000171 2.2e-09 66.6 129 63.6
Eucgr.F01338 Eucalyptus grandis HOM05D000054 ORTHO05D002584 3.7e-09 65.9 42 71.4
Lalb_Chr03g0031281 Lupinus albus HOM05D000054 ORTHO05D000171 3.7e-09 65.9 43 67.4
BcaB04g20959 Brassica carinata HOM05D000054 ORTHO05D000171 4.8e-09 65.5 155 32.3
Glyma.12G233100 Glycine max HOM05D000054 ORTHO05D000171 4.8e-09 65.5 43 72.1
arahy.Tifrunner.gnm1.ann1.A4AH1Z Arachis hypogaea HOM05D000054 ORTHO05D000171 6.3e-09 65.1 43 67.4
arahy.Tifrunner.gnm1.ann1.L894HN Arachis hypogaea HOM05D000054 ORTHO05D000171 6.3e-09 65.1 43 67.4
BcaB04g18862 Brassica carinata HOM05D000054 ORTHO05D000171 6.3e-09 65.1 44 70.5
CSS0019456 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 6.3e-09 65.1 43 65.1
Haze_09275 Corylus avellana HOM05D000054 ORTHO05D010247 6.3e-09 65.1 121 61.2
CARHR089780 Cardamine hirsuta HOM05D000054 ORTHO05D000171 8.2e-09 64.7 186 48.4
DCAR_021038 Daucus carota HOM05D000054 ORTHO05D002584 8.2e-09 64.7 52 65.4
Duzib213G0432 Durio zibethinus HOM05D000054 ORTHO05D000171 8.2e-09 64.7 44 70.5
arahy.Tifrunner.gnm1.ann1.BWB76J Arachis hypogaea HOM05D000054 ORTHO05D002584 1.1e-08 64.3 43 67.4
MSTRG.14243 Avicennia marina HOM05D000054 ORTHO05D000171 1.1e-08 64.3 40 72.5
MBI06_g16565_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 1.1e-08 64.3 48 62.5
Potri.001G385200 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.1e-08 64.3 44 68.2
Sed0026644 Sechium edule HOM05D000054 ORTHO05D000171 1.1e-08 64.3 43 72.1
GSVIVG01014113001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.1e-08 64.3 42 69.0
arahy.Tifrunner.gnm1.ann1.H4GB3B Arachis hypogaea HOM05D000054 ORTHO05D000171 1.4e-08 63.9 178 47.2
Hma1.2p1_0050F.1_g028940 Hydrangea macrophylla HOM05D000054 ORTHO05D000171 1.4e-08 63.9 43 67.4
MD03G1246400 Malus domestica HOM05D000054 ORTHO05D002584 1.4e-08 63.9 42 69.0
Sed0026880 Sechium edule HOM05D000054 ORTHO05D000171 1.4e-08 63.9 43 67.4
BcaB07g32562 Brassica carinata HOM05D000054 ORTHO05D002584 1.8e-08 63.5 131 57.3
DCAR_021036 Daucus carota HOM05D000054 ORTHO05D002584 1.8e-08 63.5 43 65.1
PSO675G0994 Papaver somniferum HOM05D000054 ORTHO05D000171 1.8e-08 63.5 42 64.3
Thecc.07G129300 Theobroma cacao HOM05D000054 ORTHO05D000171 1.8e-08 63.5 48 66.7
CSS0037123 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.4e-08 63.2 43 62.8
Duzib268G1389 Durio zibethinus HOM05D000054 ORTHO05D000171 2.4e-08 63.2 43 67.4
Medtr8g059605 Medicago truncatula HOM05D000054 ORTHO05D000171 2.4e-08 63.2 43 65.1
PGSC0003DMG400028617 Solanum tuberosum HOM05D000054 ORTHO05D000171 2.4e-08 63.2 43 65.1
vmacro09411 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 2.4e-08 63.2 175 56.0
VMungo1080G1380 Vigna mungo HOM05D000054 ORTHO05D000171 2.4e-08 63.2 48 66.7
CsaV3_4G032840 Cucumis sativus L. HOM05D000054 ORTHO05D000171 3.1e-08 62.8 43 72.1
FvH4_3g17841 Fragaria vesca HOM05D000054 ORTHO05D000171 3.1e-08 62.8 42 66.7
FAN11G0852 Fragaria x ananassa HOM05D000054 ORTHO05D000171 3.1e-08 62.8 42 66.7
Actinidia00876 Actinidia chinensis HOM05D000054 ORTHO05D000171 4.1e-08 62.4 193 52.3
AL1G61930 Arabidopsis lyrata HOM05D000054 ORTHO05D000171 4.1e-08 62.4 178 52.2
FAN21G2363 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.1e-08 62.4 42 66.7
Gohir.A01G048800 Gossypium hirsutum HOM05D000054 ORTHO05D000171 4.1e-08 62.4 38 73.7
Nitab4.5_0005453g0030 Nicotiana tabacum HOM05D000054 ORTHO05D000171 4.1e-08 62.4 149 38.3
VMungo1080G1664 Vigna mungo HOM05D000054 ORTHO05D000171 4.1e-08 62.4 43 69.8
Atru.chr2.2015 Acer truncatum HOM05D000054 ORTHO05D000171 5.3e-08 62.0 39 71.8
arahy.Tifrunner.gnm1.ann1.4FK00S Arachis hypogaea HOM05D000054 ORTHO05D000171 5.3e-08 62.0 178 47.2
Carub.0003s1450 Capsella rubella HOM05D000054 ORTHO05D000171 5.3e-08 62.0 43 67.4
MD03G1247100 Malus domestica HOM05D000054 ORTHO05D000171 5.3e-08 62.0 138 47.8
Sabra16G0254000 Salix brachista HOM05D000054 ORTHO05D002584 5.3e-08 62.0 44 65.9
Ciclev10018686m.g Citrus clementina HOM05D000054 ORTHO05D000171 6.9e-08 61.6 39 71.8
PSO170G2036 Papaver somniferum HOM05D000054 ORTHO05D000171 6.9e-08 61.6 40 67.5
Cc05_g10830 Coffea canephora HOM05D000054 ORTHO05D000171 9.0e-08 61.2 39 64.1
Phvul.005G078100 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 9.0e-08 61.2 43 67.4
Thecc.07G129200 Theobroma cacao HOM05D000054 ORTHO05D000171 9.0e-08 61.2 44 65.9
TPR.G6785 Trifolium pratense HOM05D000054 ORTHO05D000171 9.0e-08 61.2 155 51.6
Ca_06021_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 1.2e-07 60.8 43 67.4
MBI07_g00474_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 1.5e-07 60.5 39 66.7
RcHm_v2.0_Chr5g0029931 Rosa chinensis HOM05D000054 ORTHO05D010247 1.5e-07 60.5 127 34.6
Sabra16G0253900 Salix brachista HOM05D000054 ORTHO05D005077 1.5e-07 60.5 49 57.1
Aqoxy4G00212 Aquilegia oxysepala HOM05D000054 ORTHO05D000171 2.0e-07 60.1 69 49.3
Lalb_Chr03g0031271 Lupinus albus HOM05D000054 ORTHO05D000171 2.0e-07 60.1 43 60.5
Medtr8g059615 Medicago truncatula HOM05D000054 ORTHO05D000171 2.0e-07 60.1 43 58.1
VMungo1080G0576 Vigna mungo HOM05D000054 ORTHO05D000171 2.0e-07 60.1 43 67.4
arahy.Tifrunner.gnm1.ann1.R9RQIH Arachis hypogaea HOM05D000054 ORTHO05D002584 2.6e-07 59.7 41 63.4
CiPaw.12G111500 Carya illinoinensis HOM05D000054 ORTHO05D000171 2.6e-07 59.7 43 62.8
Sabra16G0253300 Salix brachista HOM05D000054 ORTHO05D005077 2.6e-07 59.7 39 64.1
HPP92_022984 Vanilla planifolia HOM05D000054 ORTHO05D000171 2.6e-07 59.7 43 58.1
arahy.Tifrunner.gnm1.ann1.W4IL1P Arachis hypogaea HOM05D000054 ORTHO05D000171 3.4e-07 59.3 43 60.5
Lsat_1_v5_gn_7_26820 Lactuca sativa HOM05D000054 ORTHO05D000171 3.4e-07 59.3 177 45.8
Nn3g21042 Nelumbo nucifera HOM05D000054 ORTHO05D000171 3.4e-07 59.3 160 47.5
Sed0009878 Sechium edule HOM05D000054 ORTHO05D000171 3.4e-07 59.3 38 68.4
Lsat_1_v5_gn_7_26661 Lactuca sativa HOM05D000054 ORTHO05D000171 4.5e-07 58.9 41 68.3
TPR.G16469 Trifolium pratense HOM05D000054 ORTHO05D000171 4.5e-07 58.9 43 60.5
arahy.Tifrunner.gnm1.ann1.X1JR32 Arachis hypogaea HOM05D000054 ORTHO05D000171 5.9e-07 58.5 42 59.5
HanXRQChr16g0498651 Helianthus annuus HOM05D000054 ORTHO05D000171 5.9e-07 58.5 42 64.3
GSVIVG01014133001 Vitis vinifera HOM05D000054 ORTHO05D002584 5.9e-07 58.5 43 62.8
GSVIVG01021276001 Vitis vinifera HOM05D000054 ORTHO05D002584 5.9e-07 58.5 42 59.5
Lj8C446G5 Lonicera japonica HOM05D000054 ORTHO05D014621 7.7e-07 58.2 118 61.9
MBI06_g10743_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 7.7e-07 58.2 187 43.9
SGA_v2.0_scaffold73G24392 Striga asiatica HOM05D000054 ORTHO05D000171 7.7e-07 58.2 43 62.8
CiPaw.11G158200 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.0e-06 57.8 40 65.0
Eucgr.E02839 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.0e-06 57.8 141 53.9
Eucgr.K01731 Eucalyptus grandis HOM05D000054 ORTHO05D002584 1.0e-06 57.8 42 59.5
Lalb_Chr01g0016471 Lupinus albus HOM05D000054 ORTHO05D000171 1.0e-06 57.8 43 62.8
MBI19_g13324_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 1.0e-06 57.8 50 54.0
Nn3g21041 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.0e-06 57.8 48 58.3
PSO782G0554 Papaver somniferum HOM05D000054 ORTHO05D000171 1.0e-06 57.8 43 60.5
Sed0010607 Sechium edule HOM05D000054 ORTHO05D000171 1.0e-06 57.8 43 60.5
MELO3C025664.2 Cucumis melo HOM05D000054 ORTHO05D000171 1.3e-06 57.4 48 60.4
Nn3g21044 Nelumbo nucifera HOM05D000054 ORTHO05D002584 1.3e-06 57.4 43 55.8
Nitab4.5_0013354g0010 Nicotiana tabacum HOM05D000054 ORTHO05D000171 1.3e-06 57.4 173 24.9
PSO170G2088 Papaver somniferum HOM05D000054 ORTHO05D000171 1.3e-06 57.4 178 46.1
PSO170G6227 Papaver somniferum HOM05D000054 ORTHO05D000171 1.3e-06 57.4 42 61.9
arahy.Tifrunner.gnm1.ann1.LLA61B Arachis hypogaea HOM05D000054 ORTHO05D000171 1.7e-06 57.0 176 49.4
Ciclev10018771m.g Citrus clementina HOM05D000054 ORTHO05D000171 1.7e-06 57.0 42 61.9
Manes.16G044300 Manihot esculenta HOM05D000054 ORTHO05D000171 1.7e-06 57.0 41 65.9
PSO528G0158 Papaver somniferum HOM05D000054 ORTHO05D000171 1.7e-06 57.0 182 45.1
Psat4g140680 Pisum sativum HOM05D000054 ORTHO05D000171 1.7e-06 57.0 43 58.1
CsaV3_4G032890 Cucumis sativus L. HOM05D000054 ORTHO05D000171 2.2e-06 56.6 48 58.3
Peaxi162Scf00112g01913 Petunia axillaris HOM05D000054 ORTHO05D000171 2.2e-06 56.6 42 59.5
Prupe.4G157800 Prunus persica HOM05D000054 ORTHO05D000171 2.2e-06 56.6 177 47.5
TAR624G0629 Trochodendron aralioides HOM05D000054 ORTHO05D000171 2.2e-06 56.6 43 65.1
ECA236G2881 Erigeron canadensis HOM05D000054 ORTHO05D000171 2.9e-06 56.2 42 61.9
Nn6g34448 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.9e-06 56.2 42 57.1
PSO063G1391 Papaver somniferum HOM05D000054 ORTHO05D000171 2.9e-06 56.2 43 58.1
Psat2g027400 Pisum sativum HOM05D000054 ORTHO05D000171 2.9e-06 56.2 48 62.5
GSVIVG01014150001 Vitis vinifera HOM05D000054 ORTHO05D000171 2.9e-06 56.2 43 60.5
AL3G27150 Arabidopsis lyrata HOM05D000054 ORTHO05D000171 3.8e-06 55.8 48 58.3
Glyma.12G233300 Glycine max HOM05D000054 ORTHO05D000171 3.8e-06 55.8 48 58.3
Glyma.13G266100 Glycine max HOM05D000054 ORTHO05D000171 3.8e-06 55.8 43 62.8
Gohir.A04G044400 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.8e-06 55.8 39 64.1
TPR.G13171 Trifolium pratense HOM05D000054 ORTHO05D000171 3.8e-06 55.8 42 59.5
arahy.Tifrunner.gnm1.ann1.FI1HV3 Arachis hypogaea HOM05D000054 ORTHO05D000171 5.0e-06 55.5 190 50.5
TAR627G0745 Trochodendron aralioides HOM05D000054 ORTHO05D002584 5.0e-06 55.5 47 61.7
GSVIVG01014117001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.0e-06 55.5 39 64.1
Ciclev10024314m.g Citrus clementina HOM05D000054 ORTHO05D000171 6.5e-06 55.1 178 47.8
DCAR_021032 Daucus carota HOM05D000054 ORTHO05D002584 6.5e-06 55.1 48 58.3
Aqoxy4G00208 Aquilegia oxysepala HOM05D000054 ORTHO05D000171 8.5e-06 54.7 38 63.2
Cc05_g10860 Coffea canephora HOM05D000054 ORTHO05D000171 8.5e-06 54.7 44 61.4
CsaV3_4G008280 Cucumis sativus L. HOM05D000054 ORTHO05D000171 8.5e-06 54.7 43 58.1
HanXRQChr09g0258651 Helianthus annuus HOM05D000054 ORTHO05D000171 8.5e-06 54.7 129 30.2
Lalb_Chr25g0285671 Lupinus albus HOM05D000054 ORTHO05D000171 8.5e-06 54.7 43 58.1


User provided reference genes

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