Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 8.9e-33 144.1 148 100.0
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.9e-27 126.3 152 83.6
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 5.6e-27 124.8 148 89.2
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 4.6e-21 105.1 155 80.6
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 8.6e-20 100.9 152 76.3
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 1.9e-14 83.2 152 73.0
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 7.1e-14 81.3 185 54.6
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 7.8e-13 77.8 149 64.4
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 1.0e-12 77.4 128 78.1
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.6e-10 70.1 56 69.6
A01p21710 Brassica napus HOM05D020768 ORTHO05D007063 3.6e-10 68.9 152 71.7
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 4.7e-10 68.6 57 73.7
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 4.7e-10 68.6 57 73.7
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 1.1e-09 67.4 57 71.9
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.2e-07 59.7 56 62.5
BolC1t02654H Brassica oleracea HOM05D020768 ORTHO05D007063 3.8e-07 58.9 151 67.5
BcaC09g50272 Brassica carinata HOM05D020768 ORTHO05D007063 6.4e-07 58.2 151 67.5
C01p27070 Brassica napus HOM05D020768 ORTHO05D007063 6.4e-07 58.2 151 67.5
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 1.1e-06 57.4 56 64.3
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.4e-06 57.0 52 65.4
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 3.2e-06 55.8 56 60.7
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 3.2e-06 55.8 56 60.7
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 4.2e-06 55.5 51 58.8
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 5.4e-06 55.1 150 67.3
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 5.4e-06 55.1 43 67.4
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.4e-06 55.1 51 60.8
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.2e-06 54.3 52 65.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 9.2e-06 54.3 52 65.4
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 9.2e-06 54.3 56 55.4


User provided reference genes

Program Settings