Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 1.5e-58 229.2 108 100.0
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 7.4e-53 210.3 108 89.8
Thhalv10027327m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 2.8e-36 155.2 105 71.4
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.1e-35 153.3 103 68.9
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 3.1e-35 151.8 105 69.5
Carub.0007s2597 Capsella rubella HOM05D010807 ORTHO05D010698 5.5e-32 141.0 100 69.0
BolC8t48301H Brassica oleracea HOM05D010807 ORTHO05D010698 8.2e-28 127.1 102 60.8
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 1.1e-27 126.7 102 57.8
Thhalv10026979m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 1.1e-27 126.7 97 68.0
CARHR260120 Cardamine hirsuta HOM05D010807 ORTHO05D010698 2.2e-25 119.0 101 59.4
CARHR056520 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.4e-24 116.3 104 52.9
AT2G05117 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 3.2e-24 115.2 100 56.0
CARHR290150 Cardamine hirsuta HOM05D010807 ORTHO05D010698 3.2e-24 115.2 101 55.4
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 3.2e-24 115.2 102 55.9
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 6.7e-22 107.5 102 52.0
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 2.0e-21 105.9 100 53.0
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 6.3e-20 100.9 100 48.0
Thhalv10026885m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 2.4e-19 99.0 103 50.5
Thhalv10027303m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 2.6e-18 95.5 103 50.5
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.4e-11 73.2 104 43.3
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.1e-11 71.6 103 47.6
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 5.3e-11 71.2 103 44.7
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 5.3e-11 71.2 102 42.2
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 7.0e-11 70.9 103 46.6
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.6e-10 69.7 103 41.7
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 5.9e-10 67.8 102 42.2
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 2.9e-09 65.5 102 41.2
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 3.8e-09 65.1 98 41.8
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 3.8e-09 65.1 98 41.8
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 1.5e-08 63.2 98 40.8
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 2.5e-08 62.4 101 39.6
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 3.2e-08 62.0 101 40.6
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 7.2e-08 60.8 59 47.5
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 2.7e-07 58.9 104 38.5
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 2.7e-07 58.9 104 38.5
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 3.6e-07 58.5 104 38.5
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 3.6e-07 58.5 104 38.5
Glyma.08G254850 Glycine max HOM05D015479 ORTHO05D011556 3.6e-07 58.5 59 47.5
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 4.7e-07 58.2 103 36.9
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 4.7e-07 58.2 103 36.9
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 6.1e-07 57.8 104 38.5
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 8.0e-07 57.4 104 38.5
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 1.4e-06 56.6 98 39.8
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.4e-06 56.6 139 33.1
Potri.004G201100 Populus trichocarpa HOM05D012769 ORTHO05D011556 2.3e-06 55.8 71 38.0
Manes.09G033900 Manihot esculenta HOM05D012769 ORTHO05D011556 3.0e-06 55.5 60 45.0
Manes.09G033825 Manihot esculenta HOM05D012769 ORTHO05D010698 4.0e-06 55.1 60 43.3
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 5.2e-06 54.7 102 37.3
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 8.8e-06 53.9 101 34.7
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 8.8e-06 53.9 101 35.6


User provided reference genes

Program Settings