Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 4.9e-117 424.9 279 100.0
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 1.5e-113 413.3 279 95.3
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 9.0e-103 377.5 278 80.2
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 6.4e-101 371.3 278 81.7
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 3.2e-100 369.0 278 82.7
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 5.5e-100 368.2 278 81.7
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 7.9e-99 364.4 279 79.6
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 4.3e-97 358.6 278 78.1
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 7.4e-97 357.8 278 72.7
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 8.1e-96 354.4 278 76.3
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 4.0e-95 352.1 278 75.9
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 2.1e-91 339.7 308 70.8
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 4.3e-89 332.0 326 62.0
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.6e-86 322.8 279 62.0
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 5.9e-86 321.6 275 66.9
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 5.9e-86 321.6 275 65.8
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 3.8e-85 318.9 274 66.8
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.9e-84 316.6 275 65.1
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.1e-83 313.2 207 72.0
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 2.7e-83 312.8 178 81.5
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 3.6e-83 312.4 183 80.9
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 3.6e-83 312.4 180 82.2
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 4.6e-83 312.0 180 81.7
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 7.9e-83 311.2 180 81.1
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.0e-82 310.8 180 80.0
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 3.0e-82 309.3 182 78.6
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 3.0e-82 309.3 181 80.1
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 5.1e-82 308.5 182 79.1
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 6.7e-82 308.1 180 78.9
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 8.7e-82 307.8 183 80.3
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.5e-81 307.0 180 79.4
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.5e-81 307.0 180 80.0
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.9e-81 306.6 182 80.2
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.9e-81 306.6 180 80.0
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 3.3e-81 305.8 182 81.3
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 3.3e-81 305.8 183 77.6
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 3.3e-81 305.8 183 79.8
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 3.3e-81 305.8 178 81.5
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 4.3e-81 305.4 182 76.9
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 4.3e-81 305.4 280 63.2
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 5.7e-81 305.1 181 79.6
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 5.7e-81 305.1 208 69.7
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 7.4e-81 304.7 180 79.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 9.7e-81 304.3 182 76.4
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 9.7e-81 304.3 180 80.6
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 1.3e-80 303.9 207 80.7
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 1.3e-80 303.9 307 58.6
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.6e-80 303.5 184 78.3
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 2.2e-80 303.1 178 79.8
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 2.8e-80 302.8 278 64.4
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.8e-80 302.8 182 76.9
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.4e-79 300.4 179 79.9
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 1.4e-79 300.4 179 77.1
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.4e-79 300.4 178 79.2
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.4e-79 300.4 184 76.6
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.8e-79 300.1 275 55.6
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 2.4e-79 299.7 180 78.9
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 5.3e-79 298.5 183 76.0
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.5e-78 297.0 183 75.4
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 2.6e-78 296.2 179 76.0
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 5.9e-78 295.0 189 73.5
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.9e-78 295.0 275 60.7
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 7.7e-78 294.7 184 77.7
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.3e-77 293.9 183 73.8
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.7e-77 293.5 183 74.3
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 2.9e-77 292.7 317 48.9
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 5.0e-77 292.0 183 75.4
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.4e-76 290.4 183 75.4
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 1.9e-76 290.0 179 77.7
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 1.2e-75 287.3 326 54.9
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 1.6e-75 287.0 168 79.8
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 2.7e-75 286.2 179 74.3
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 4.6e-75 285.4 172 78.5
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.0e-74 284.3 168 78.0
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.0e-74 284.3 170 80.0
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.4e-74 283.9 169 80.5
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.9e-74 282.3 215 66.5
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 8.8e-74 281.2 183 71.6
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 1.3e-72 277.3 181 73.5
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 2.0e-70 270.0 169 74.6
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 2.2e-69 266.5 212 62.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.4e-68 263.8 152 80.9
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 1.0e-66 257.7 235 57.9
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 6.7e-66 255.0 164 75.0
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 2.6e-65 253.1 145 77.9
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.3e-64 250.8 200 62.0
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 2.2e-64 250.0 148 76.4
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 2.4e-63 246.5 187 64.2
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 5.3e-63 245.4 180 63.3
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 1.2e-62 244.2 188 63.3
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 4.5e-62 242.3 146 76.0
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 2.2e-61 240.0 200 63.5
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 3.3e-57 226.1 397 38.8
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 4.8e-56 222.2 178 64.6
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 8.2e-56 221.5 376 38.3
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 2.0e-54 216.9 190 63.2
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 2.0e-54 216.9 191 62.8
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 6.5e-53 211.8 129 78.3
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 1.9e-52 210.3 154 69.5
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 5.7e-49 198.7 167 59.3
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.7e-48 197.2 190 51.1
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 7.0e-47 191.8 131 68.7
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 6.5e-45 185.3 102 82.4
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.4e-42 177.6 115 74.8
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 1.1e-39 167.9 118 66.1
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 4.5e-38 162.5 113 66.4
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 2.3e-34 150.2 98 71.4
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 6.8e-34 148.7 145 55.9
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 3.7e-32 142.9 81 82.7
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 4.9e-24 115.9 107 56.1
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 1.4e-23 114.4 153 61.4
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 2.8e-19 100.1 99 52.5
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.8e-18 97.4 112 47.3
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 1.7e-08 64.3 34 88.2
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 1.9e-07 60.8 29 93.1
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 1.9e-07 60.8 36 77.8
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 3.5e-06 56.6 38 68.4


User provided reference genes

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