Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.9e-35 151.4 77 100.0
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 3.2e-34 147.9 75 98.7
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 9.3e-34 146.4 75 97.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 4.6e-33 144.1 75 96.0
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.0e-32 142.9 75 92.0
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 2.3e-32 141.7 75 93.3
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 2.3e-32 141.7 75 93.3
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 3.0e-32 141.4 75 93.3
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 3.0e-32 141.4 75 93.3
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 6.7e-32 140.2 75 92.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 6.7e-32 140.2 75 92.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 6.7e-32 140.2 75 92.0
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 6.7e-32 140.2 75 90.7
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.5e-31 139.0 75 90.7
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.9e-31 138.7 75 89.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.3e-30 136.0 77 85.7
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.6e-30 135.6 77 85.7
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 1.4e-29 132.5 77 84.4
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.4e-29 131.7 73 87.7
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 2.4e-29 131.7 77 81.8
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 3.1e-29 131.3 76 82.9
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 3.1e-29 131.3 77 81.8
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 4.0e-29 131.0 77 81.8
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 4.0e-29 131.0 77 80.5
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 4.0e-29 131.0 75 85.3
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.3e-29 130.6 74 83.8
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.3e-29 130.6 74 83.8
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.3e-29 130.6 74 83.8
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 1.2e-28 129.4 77 80.5
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 81.1
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 81.1
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 82.4
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.6e-28 128.3 77 81.8
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.6e-28 128.3 77 81.8
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 2.6e-28 128.3 77 79.2
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 2.6e-28 128.3 74 82.4
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 2.6e-28 128.3 76 80.3
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 5.8e-28 127.1 77 80.5
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 5.8e-28 127.1 74 81.1
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 5.8e-28 127.1 77 79.2
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.0e-27 126.3 74 79.7
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.3e-27 125.9 77 77.9
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.3e-27 125.9 74 79.7
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.7e-27 125.6 72 81.9
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 1.7e-27 125.6 74 81.1
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 3.8e-27 124.4 77 77.9
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 6.5e-27 123.6 75 74.7
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 77.0
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.4e-26 122.5 74 75.7
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.4e-26 122.5 74 75.7
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.9e-26 122.1 74 77.0
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 76.6
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 75.3
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 2.5e-26 121.7 73 76.7
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 4.2e-26 120.9 77 74.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 5.5e-26 120.6 74 78.4
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 7.1e-26 120.2 74 78.4
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 9.3e-26 119.8 67 86.6
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.2e-25 119.4 74 71.6
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.6e-25 119.0 74 75.7
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.1e-25 118.6 74 75.7
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 2.7e-25 118.2 76 72.4
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.7e-25 118.2 77 75.3
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.7e-25 118.2 77 75.3
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 7.9e-25 116.7 74 73.0
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.0e-24 116.3 74 73.0
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.0e-24 116.3 74 75.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.0e-24 116.3 76 73.7
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.3e-24 115.9 73 72.6
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.8e-24 115.5 74 73.0
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.8e-24 115.5 77 70.1
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 5.1e-24 114.0 74 73.0
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 6.7e-24 113.6 71 76.1
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 6.7e-24 113.6 74 73.0
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 6.7e-24 113.6 74 71.6
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 8.7e-24 113.2 75 69.3
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.1e-23 112.8 74 68.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.1e-23 112.8 77 72.7
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 3.3e-23 111.3 77 71.4
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 3.3e-23 111.3 75 70.7
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 3.3e-23 111.3 77 71.4
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 4.3e-23 110.9 74 71.6
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 4.3e-23 110.9 74 73.0
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 7.4e-23 110.2 73 71.2
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 9.6e-23 109.8 75 72.0
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.6e-22 109.0 73 71.2
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.6e-22 109.0 73 71.2
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 2.1e-22 108.6 73 72.6
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 2.8e-22 108.2 77 64.9
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 3.7e-22 107.8 73 69.9
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 3.7e-22 107.8 73 71.2
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 6.3e-22 107.1 104 56.7
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 1.1e-21 106.3 73 69.9
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.4e-21 105.9 66 75.8
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 1.4e-21 105.9 75 66.7
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 1.8e-21 105.5 75 66.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 1.8e-21 105.5 75 66.7
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 4.1e-21 104.4 75 66.7
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 5.3e-21 104.0 75 65.3
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.2e-20 102.8 67 67.2
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 1.2e-20 102.8 73 67.1
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 1.2e-20 102.8 73 67.1
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 7.6e-20 100.1 75 64.0
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 2.2e-19 98.6 76 59.2
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 8.5e-19 96.7 68 61.8
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 9.3e-18 93.2 72 61.1
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 3.6e-17 91.3 116 44.0
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.0e-16 89.7 66 65.2
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 7.4e-15 83.6 68 52.9
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 3.4e-12 74.7 47 72.3
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 2.9e-11 71.6 62 51.6
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 3.8e-11 71.2 57 59.6
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 3.2e-10 68.2 46 69.6
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 6.1e-09 63.9 66 47.0
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 6.1e-09 63.9 43 69.8
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 1.8e-08 62.4 67 47.8
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 2.3e-08 62.0 34 85.3
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 5.1e-08 60.8 43 65.1
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 2.0e-07 58.9 43 62.8
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 3.3e-07 58.2 35 74.3
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.4e-07 57.0 41 65.9
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 4.8e-06 54.3 35 65.7


User provided reference genes

Program Settings