Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 4.5e-54 214.2 95 100.0
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 3.6e-43 177.9 95 86.3
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 3.1e-39 164.9 95 73.7
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 9.1e-39 163.3 95 71.6
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 3.3e-33 144.8 92 64.1
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 1.1e-31 139.8 92 64.1
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 7.7e-30 133.7 91 61.5
AT5G39645 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 7.7e-22 107.1 57 84.2
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 2.2e-21 105.5 92 50.0
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 8.5e-21 103.6 97 50.5
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 5.2e-18 94.4 95 45.3
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 5.2e-18 94.4 94 47.9
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 9.8e-17 90.1 94 45.7
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 3.7e-16 88.2 93 43.0
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 4.8e-16 87.8 94 44.7
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 8.3e-16 87.0 95 42.1
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 1.1e-15 86.7 87 47.1
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 2.4e-15 85.5 93 41.9
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 4.1e-15 84.7 56 57.1
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 4.1e-15 84.7 56 57.1
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 5.4e-15 84.3 47 68.1
MELO3C029307.2 Cucumis melo HOM05D008282 ORTHO05D009173 5.4e-15 84.3 54 59.3
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 9.1e-15 83.6 74 45.9
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 2.0e-14 82.4 56 55.4
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 4.5e-14 81.3 76 44.7
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 5.9e-14 80.9 74 45.9
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 5.9e-14 80.9 56 53.6
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 7.7e-14 80.5 75 46.7
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 1.0e-13 80.1 54 53.7
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.0e-13 80.1 54 53.7
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.0e-13 80.1 75 46.7
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.3e-13 79.7 86 41.9
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 2.3e-13 79.0 56 53.6
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 2.3e-13 79.0 87 40.2
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 2.9e-13 78.6 87 40.2
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 3.8e-13 78.2 87 40.2
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 3.8e-13 78.2 71 47.9
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 3.8e-13 78.2 89 41.6
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.0e-13 77.8 75 45.3
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 8.6e-13 77.0 56 55.4
Potri.005G074350 Populus trichocarpa HOM05D008282 ORTHO05D009173 8.6e-13 77.0 94 42.6
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.1e-12 76.6 89 40.4
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 2.5e-12 75.5 89 40.4
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 3.2e-12 75.1 83 41.0
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 4.2e-12 74.7 72 44.4
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 5.5e-12 74.3 74 43.2
Sopen07g004270 Solanum pennellii HOM05D008282 ORTHO05D009173 9.5e-12 73.6 56 50.0
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 1.8e-10 69.3 49 53.1
ClCG03G016530 Citrullus lanatus HOM05D008282 ORTHO05D009173 3.0e-10 68.6 48 52.1
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 4.0e-10 68.2 83 37.3
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 6.8e-10 67.4 91 37.4
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 6.8e-10 67.4 91 37.4
AT4G14272 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 8.8e-10 67.0 81 40.7
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 3.4e-09 65.1 83 36.1
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 3.4e-09 65.1 83 36.1
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 5.7e-09 64.3 94 34.0
Thecc.05G205200 Theobroma cacao HOM05D008282 ORTHO05D000004 3.7e-08 61.6 54 46.3
Atru.chr11.1626 Acer truncatum HOM05D008282 ORTHO05D009173 4.9e-08 61.2 74 41.9
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.4e-07 59.7 49 49.0
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 2.7e-06 55.5 54 44.4
PSO063G3641 Papaver somniferum HOM05D008282 ORTHO05D009173 5.9e-06 54.3 55 41.8
Gohir.A02G058204 Gossypium hirsutum HOM05D008282 ORTHO05D009173 7.8e-06 53.9 59 40.7


User provided reference genes

Program Settings