Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 7.0e-69 263.8 135 100.0
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 2.8e-65 251.9 135 95.6
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 8.3e-62 240.4 135 91.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.6e-60 236.1 135 91.1
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 3.9e-59 231.5 134 90.3
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.6e-57 224.9 137 88.3
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.2e-55 219.9 135 85.2
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.9e-53 212.6 135 84.4
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 4.1e-53 211.5 135 83.7
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 7.0e-53 210.7 133 84.2
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.6e-52 209.5 136 84.6
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 2.7e-52 208.8 134 83.6
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.0e-51 206.8 128 82.8
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.8e-49 198.7 129 82.2
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 8.9e-48 193.7 135 73.3
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.2e-47 193.4 133 75.9
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.5e-47 193.0 135 77.8
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 9.8e-47 190.3 135 71.9
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.2e-46 189.1 135 69.6
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.2e-46 189.1 132 72.7
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.9e-46 188.7 135 69.6
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.1e-45 186.8 135 71.1
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.1e-45 186.8 115 75.7
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.4e-45 186.4 135 71.9
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.4e-45 185.7 132 70.5
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.4e-45 185.7 137 67.9
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 2.4e-45 185.7 137 67.9
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 3.2e-45 185.3 135 68.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.6e-44 183.0 137 67.2
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.7e-44 182.2 112 75.9
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 2.7e-44 182.2 105 80.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 3.5e-44 181.8 135 67.4
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 3.5e-44 181.8 135 68.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.6e-44 181.4 104 79.8
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 4.6e-44 181.4 120 72.5
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 7.8e-44 180.6 110 79.1
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.0e-43 180.3 130 69.2
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.3e-43 179.9 113 75.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.7e-43 179.5 112 75.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-43 179.5 113 74.3
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.3e-43 179.1 119 74.8
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.3e-43 179.1 115 72.2
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 5.1e-43 177.9 139 67.6
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.6e-43 177.6 123 70.7
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 8.6e-43 177.2 131 67.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.1e-42 176.8 105 79.0
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.1e-42 176.8 108 77.8
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.1e-42 176.8 113 72.6
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 1.9e-42 176.0 112 78.6
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.5e-42 175.6 133 67.7
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 3.3e-42 175.3 132 68.2
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.3e-42 174.9 131 66.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.3e-42 174.1 123 71.5
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 7.3e-42 174.1 109 74.3
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.5e-42 173.7 108 74.1
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.6e-41 172.9 134 67.2
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 4.7e-41 171.4 108 75.0
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 8.1e-41 170.6 123 70.7
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 8.1e-41 170.6 126 69.8
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.1e-40 170.2 122 69.7
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.4e-40 169.9 134 66.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 1.4e-40 169.9 119 71.4
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.8e-40 169.5 121 71.9
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.3e-40 169.1 130 67.7
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.1e-40 168.7 110 70.0
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.1e-40 168.7 132 65.9
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 4.0e-40 168.3 144 61.8
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 4.0e-40 168.3 132 65.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 5.2e-40 167.9 114 73.7
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 6.8e-40 167.5 132 66.7
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 6.8e-40 167.5 133 63.9
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.5e-39 166.4 111 70.3
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.5e-39 166.4 112 73.2
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.6e-39 165.6 132 64.4
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 4.4e-39 164.9 127 64.6
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 4.4e-39 164.9 123 66.7
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 7.6e-39 164.1 131 64.9
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.3e-38 163.3 97 78.4
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.7e-38 162.9 112 66.1
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.7e-38 162.9 131 64.1
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.2e-38 162.5 135 63.0
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.9e-38 162.2 124 62.1
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 3.8e-38 161.8 124 62.1
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.9e-38 161.4 121 67.8
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 6.4e-38 161.0 132 62.1
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.9e-37 159.5 135 61.5
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.4e-37 159.1 99 75.8
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 3.2e-37 158.7 105 67.6
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 3.2e-37 158.7 145 61.4
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.1e-37 158.3 99 75.8
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 7.1e-37 157.5 162 53.7
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.1e-36 156.0 104 68.3
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.5e-36 155.2 162 54.3
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 4.6e-36 154.8 105 70.5
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.7e-35 152.9 122 59.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.6e-35 151.0 109 67.9
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.1e-34 150.2 165 50.3
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 5.6e-34 147.9 131 58.8
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 9.6e-34 147.1 126 58.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.2e-33 146.7 210 45.7
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.1e-32 143.7 91 74.7
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.2e-31 140.2 174 47.1
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.0e-31 139.4 109 67.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.7e-30 136.3 109 65.1
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.4e-29 133.3 87 75.9
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.2e-28 130.2 135 56.3
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.5e-26 122.5 85 72.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 3.3e-26 122.1 75 74.7
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.6e-25 118.6 120 54.2
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 8.1e-25 117.5 68 85.3
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 5.3e-24 114.8 103 51.5
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.0e-23 112.8 85 74.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.9e-22 108.2 123 48.0
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 8.4e-22 107.5 66 75.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.1e-21 107.1 67 74.6
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.9e-21 106.3 66 74.2
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.0e-19 100.5 87 57.5
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 5.3e-16 88.2 101 43.6
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 5.3e-16 88.2 67 65.7
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.3e-14 83.6 103 39.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.2e-14 82.8 98 37.8
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.4e-13 80.1 57 66.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.7e-12 75.9 90 35.6
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-10 70.5 109 37.6
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.8e-09 65.9 66 56.1
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.3e-06 57.0 68 51.5


User provided reference genes

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