Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 2.3e-25 119.0 110 97.3
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 2.3e-25 119.0 110 100.0
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 4.0e-22 108.2 110 95.5
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 4.4e-21 104.8 110 92.7
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 2.2e-20 102.4 110 92.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 3.8e-20 101.7 110 80.0
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 1.9e-19 99.4 110 80.0
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.9e-19 99.4 110 83.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.9e-19 99.4 110 83.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.9e-19 99.4 110 83.6
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 3.2e-19 98.6 110 90.0
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 5.4e-19 97.8 110 89.1
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 4.6e-18 94.7 111 82.9
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 4.6e-18 94.7 111 82.9
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 7.8e-18 94.0 111 89.2
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 7.8e-18 94.0 111 89.2
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 7.8e-18 94.0 111 89.2
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-13 77.4 94 77.7
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 1.3e-12 76.6 121 75.2
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.7e-12 76.3 108 45.4
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.4e-12 74.3 110 42.7
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 6.4e-12 74.3 111 82.0
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 4.2e-11 71.6 99 74.7
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.2e-10 70.1 110 41.8
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 3.5e-10 68.6 108 40.7
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.6e-10 68.2 110 40.9
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 4.6e-10 68.2 110 40.0
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 7.8e-10 67.4 108 39.8
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.7e-09 66.2 110 40.0
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 3.0e-09 65.5 110 39.1
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 3.9e-09 65.1 107 38.3
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 5.1e-09 64.7 111 41.4
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 5.1e-09 64.7 107 38.3
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 8.7e-09 63.9 109 39.4
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-08 63.5 107 57.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-08 63.5 107 57.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.1e-08 63.5 107 57.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.1e-08 63.5 107 57.9
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.5e-08 63.2 108 38.9
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 5.6e-08 61.2 111 38.7
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 2.8e-07 58.9 107 35.5
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 4.8e-07 58.2 107 35.5
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.8e-07 58.2 109 35.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 6.2e-07 57.8 108 34.3
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 8.1e-07 57.4 94 42.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 8.1e-07 57.4 107 35.5
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.1e-06 57.0 118 39.0
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 4.0e-06 55.1 41 63.4
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.0e-06 55.1 106 34.9
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 5.3e-06 54.7 32 81.2
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 5.3e-06 54.7 32 81.2
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 6.9e-06 54.3 125 36.8
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 6.9e-06 54.3 109 32.1
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 9.0e-06 53.9 109 33.9


User provided reference genes

Program Settings