Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 7.7e-92 340.5 177 100.0
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 8.1e-49 197.6 153 67.3
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 6.0e-44 181.4 152 59.9
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 1.3e-43 180.3 153 62.1
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 7.1e-37 157.9 152 54.6
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 2.3e-35 152.9 152 53.3
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 6.2e-33 144.8 199 43.2
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 7.6e-31 137.9 148 51.4
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 4.6e-28 128.6 128 53.9
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.0e-27 127.5 164 43.9
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.8e-27 126.7 164 44.5
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.8e-27 126.7 132 50.8
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 8.7e-27 124.4 128 50.0
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 8.7e-27 124.4 128 50.0
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 4.3e-26 122.1 154 46.1
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 7.4e-26 121.3 129 49.6
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 9.6e-26 120.9 153 42.5
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 9.6e-26 120.9 153 42.5
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.6e-25 120.2 137 48.2
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 4.8e-25 118.6 153 47.1
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 1.7e-22 110.2 169 41.4
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 2.9e-22 109.4 169 40.8
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 3.8e-22 109.0 169 40.8
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 3.8e-22 109.0 169 40.8
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 4.9e-22 108.6 169 40.2
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.1e-21 107.5 171 39.2
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 7.1e-21 104.8 166 39.8
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 9.3e-21 104.4 175 38.3
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 9.3e-21 104.4 165 39.4
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.2e-20 104.0 165 39.4
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 1.2e-20 104.0 170 38.8
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.6e-20 103.6 171 40.9
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.1e-20 103.2 163 39.3
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 4.6e-20 102.1 165 38.8
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 7.9e-20 101.3 166 37.3
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.0e-19 100.9 155 40.0
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.0e-19 100.9 173 38.2
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.3e-19 100.5 173 37.6
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.9e-18 96.7 131 42.0
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 4.3e-18 95.5 167 37.7
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 2.8e-17 92.8 144 39.6
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 3.7e-17 92.4 132 43.2
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 3.7e-17 92.4 137 41.6
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 3.7e-17 92.4 137 38.7
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 6.2e-17 91.7 155 34.8
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 6.2e-17 91.7 131 41.2
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 1.8e-16 90.1 156 35.3
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 2.4e-16 89.7 136 39.7
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 3.1e-16 89.4 168 37.5
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 1.5e-15 87.0 151 37.1
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 2.0e-15 86.7 135 37.8
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 2.0e-15 86.7 138 36.2
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 2.6e-15 86.3 129 41.9
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 2.6e-15 86.3 98 50.0
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 5.8e-15 85.1 167 35.3
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 5.8e-15 85.1 134 38.1
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 5.8e-15 85.1 134 38.1
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 5.8e-15 85.1 149 36.9
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 7.6e-15 84.7 164 34.8
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 7.6e-15 84.7 84 51.2
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 7.6e-15 84.7 141 36.2
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 1.3e-14 84.0 138 36.2
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.3e-14 84.0 150 38.0
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.7e-14 83.6 145 38.6
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.7e-14 83.6 142 36.6
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.2e-14 83.2 119 42.9
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.9e-14 82.8 134 35.8
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 3.8e-14 82.4 164 36.6
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 3.8e-14 82.4 180 36.1
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 3.8e-14 82.4 144 36.8
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 3.8e-14 82.4 131 37.4
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 3.8e-14 82.4 132 40.2
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 3.8e-14 82.4 142 37.3
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 5.0e-14 82.0 141 35.5
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 6.5e-14 81.6 145 33.8
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 1.1e-13 80.9 131 38.2
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.1e-13 80.9 136 36.8
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.9e-13 80.1 131 36.6
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.5e-13 79.7 134 34.3
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 2.5e-13 79.7 110 44.5
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.2e-13 79.3 110 44.5
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.2e-13 79.0 77 50.6
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.2e-13 79.0 77 49.4
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 9.3e-13 77.8 138 34.1
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.6e-12 77.0 152 33.6
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.1e-12 76.6 80 50.0
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 2.1e-12 76.6 80 50.0
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 2.1e-12 76.6 150 34.0
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.7e-12 76.3 80 50.0
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.6e-12 75.5 87 46.0
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 4.6e-12 75.5 79 48.1
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.1e-12 75.1 105 42.9
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.0e-11 74.3 164 34.1
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-11 73.9 143 31.5
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 1.3e-11 73.9 75 49.3
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 1.3e-11 73.9 147 33.3
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.8e-11 73.6 111 38.7
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.8e-11 73.6 136 37.5
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-11 73.2 76 50.0
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.3e-11 73.2 129 34.1
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 6.7e-11 71.6 136 33.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.1e-10 70.9 144 31.2
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 1.1e-10 70.9 129 36.4
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 2.5e-10 69.7 78 44.9
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 3.3e-10 69.3 136 32.4
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 7.4e-10 68.2 136 32.4
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 9.7e-10 67.8 136 32.4
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 2.8e-09 66.2 77 44.2
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 6.3e-09 65.1 95 42.1
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 2.4e-08 63.2 64 54.7
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 1.0e-06 57.8 139 28.1
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.3e-06 57.4 101 36.6


User provided reference genes

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