Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 1.5e-228 795.8 394 100.0
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 3.3e-220 768.1 394 95.9
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 5.7e-220 767.3 394 95.9
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 8.8e-213 743.4 394 92.6
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 5.7e-212 740.7 394 92.4
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 1.8e-210 735.7 394 91.6
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 5.9e-209 730.7 394 90.9
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-208 729.6 395 90.6
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 1.3e-208 729.6 395 90.6
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 5.0e-208 727.6 393 90.6
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 2.1e-206 722.2 394 90.4
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 2.1e-206 722.2 394 90.4
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 2.7e-206 721.8 388 90.5
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 6.8e-205 717.2 394 88.6
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 9.2e-194 680.2 390 85.9
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 2.7e-193 678.7 394 85.3
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.4e-189 666.4 402 81.3
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.8e-189 666.0 402 81.3
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 9.2e-186 653.7 414 78.3
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 3.6e-174 615.1 349 87.1
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 3.6e-158 562.0 385 70.6
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.3e-155 553.5 384 69.0
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.7e-155 553.1 385 69.4
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 4.9e-155 551.6 388 70.1
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 6.4e-155 551.2 381 69.6
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 6.4e-155 551.2 385 69.1
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 6.0e-153 544.7 379 71.0
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 3.9e-152 542.0 405 66.7
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 6.6e-152 541.2 390 68.5
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 2.5e-151 539.3 405 66.2
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.6e-150 536.6 388 66.8
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 1.1e-149 533.9 388 66.2
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.8e-149 533.1 384 67.7
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.4e-149 532.7 388 66.0
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 3.1e-149 532.3 372 70.2
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 6.9e-149 531.2 396 65.4
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 9.0e-149 530.8 388 66.0
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 9.0e-149 530.8 398 66.1
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.5e-148 530.0 401 64.1
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.5e-148 530.0 396 65.2
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 1.5e-148 530.0 393 66.7
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 2.6e-148 529.3 378 68.5
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 7.6e-148 527.7 388 66.5
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 9.9e-148 527.3 388 65.7
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 6.4e-147 524.6 381 66.1
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 7.1e-146 521.2 398 65.1
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.2e-145 520.4 393 64.4
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 1.6e-145 520.0 380 66.3
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 3.5e-145 518.8 386 66.6
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 4.6e-145 518.5 383 66.3
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 4.6e-145 518.5 384 65.9
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 6.0e-145 518.1 373 68.1
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 7.9e-145 517.7 396 63.6
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 1.3e-144 516.9 380 66.8
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 3.9e-144 515.4 378 66.7
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 1.9e-143 513.1 375 66.9
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 3.3e-143 512.3 379 65.7
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 4.3e-143 511.9 408 64.0
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 4.3e-143 511.9 397 62.7
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 5.6e-143 511.5 385 64.9
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 5.6e-143 511.5 371 66.6
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 7.4e-143 511.1 371 66.3
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 7.4e-143 511.1 396 64.6
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 9.6e-143 510.8 373 67.3
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 9.6e-143 510.8 379 65.4
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 2.8e-142 509.2 369 66.7
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 4.8e-142 508.4 371 65.2
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 6.2e-142 508.1 370 67.0
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 8.1e-142 507.7 379 65.7
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 1.1e-141 507.3 392 65.3
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 1.4e-141 506.9 406 63.8
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 2.4e-141 506.1 379 64.6
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 2.4e-141 506.1 379 64.6
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 4.0e-141 505.4 384 64.6
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 1.2e-140 503.8 375 65.9
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 2.6e-140 502.7 383 65.3
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 4.5e-140 501.9 376 64.6
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 7.6e-140 501.1 401 61.8
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.7e-139 500.0 376 64.9
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 3.8e-139 498.8 367 65.4
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 4.9e-139 498.4 374 65.0
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 6.4e-139 498.0 401 60.3
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 8.4e-139 497.7 376 65.4
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 1.1e-138 497.3 405 61.2
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 1.1e-138 497.3 377 63.9
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 3.2e-138 495.7 381 62.7
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 4.2e-138 495.4 376 65.2
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 1.3e-136 490.3 260 90.8
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 3.9e-136 488.8 373 64.1
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 9.6e-135 484.2 388 62.9
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 1.3e-134 483.8 396 59.6
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 2.8e-134 482.6 382 63.9
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 2.2e-131 473.0 441 54.9
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 4.9e-131 471.9 385 61.3
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 1.1e-130 470.7 368 60.9
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 4.2e-130 468.8 385 59.2
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 5.5e-130 468.4 392 58.2
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 7.1e-130 468.0 396 59.6
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 4.6e-129 465.3 268 85.1
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 3.3e-127 459.1 379 59.9
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 3.3e-127 459.1 356 62.6
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 7.4e-127 458.0 374 60.4
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 9.7e-127 457.6 379 60.2
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 4.8e-126 455.3 240 90.0
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 8.2e-126 454.5 241 89.6
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 2.6e-124 449.5 392 58.9
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 7.6e-124 448.0 382 58.9
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.2e-123 446.4 386 57.8
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.2e-123 446.4 386 57.8
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 8.7e-120 434.5 393 57.0
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 2.6e-116 422.9 368 57.1
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 5.9e-116 421.8 381 55.1
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 6.1e-113 411.8 380 53.7
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 6.1e-113 411.8 291 69.8
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.5e-108 397.1 376 52.9
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 2.0e-108 396.7 619 39.3
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 2.0e-108 396.7 287 66.9
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 4.5e-108 395.6 287 66.6
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 2.2e-107 393.3 368 53.0
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 6.5e-107 391.7 378 51.3
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 9.4e-106 387.9 380 50.0
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 1.5e-103 380.6 348 58.0
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 5.3e-101 372.1 363 49.3
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.9e-98 363.6 380 52.4
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.7e-97 359.8 374 50.8
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 2.2e-94 350.1 262 63.4
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 5.0e-91 339.0 256 61.7
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 1.1e-90 337.8 393 46.1
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 8.0e-89 331.6 256 66.8
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.4e-88 330.9 257 66.1
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 2.0e-87 327.0 248 65.7
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.7e-86 323.9 241 63.5
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 3.7e-86 322.8 247 61.1
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 3.7e-78 296.2 362 44.8
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 2.5e-74 283.5 192 66.7
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 3.7e-62 243.0 278 51.8
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 2.7e-60 236.9 157 70.1
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 5.4e-53 212.6 212 50.5
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 3.3e-50 203.4 204 54.9
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 1.4e-45 188.0 172 58.1
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.8e-41 173.7 132 59.1
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 1.8e-40 171.0 90 87.8
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 5.3e-40 169.5 114 67.5
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 1.4e-37 161.4 135 60.0
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 4.2e-37 159.8 404 33.7
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 3.3e-34 150.2 74 90.5
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 1.8e-32 144.4 367 31.1
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 6.4e-30 136.0 106 60.4
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 2.1e-28 131.0 301 31.2
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 6.0e-28 129.4 93 74.2
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 1.5e-26 124.8 93 71.0
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 5.6e-26 122.9 173 42.2
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 1.6e-25 121.3 93 69.9
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 1.3e-19 101.7 282 30.1
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 3.1e-16 90.5 52 80.8
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 4.0e-16 90.1 52 86.5
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 4.5e-15 86.7 85 52.9
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 5.8e-15 86.3 55 80.0
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 5.9e-07 59.7 63 42.9


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