Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G11940 Arabidopsis thaliana HOM05D011973 ORTHO05D014038 8.1e-154 547.0 265 100.0
AL6G46680 Arabidopsis lyrata HOM05D011973 ORTHO05D014038 2.2e-106 389.4 290 71.7
AL6G46690 Arabidopsis lyrata HOM05D011973 ORTHO05D014038 5.0e-79 298.5 233 67.8
Carub.0048s0002 Capsella rubella HOM05D011973 ORTHO05D014038 2.4e-41 173.3 169 50.9
AL6G46670 Arabidopsis lyrata HOM05D011973 ORTHO05D014038 3.0e-39 166.4 255 41.6
AT4G11930 Arabidopsis thaliana HOM05D011973 ORTHO05D014038 9.0e-36 154.8 266 38.3
AT4G38065 Arabidopsis thaliana HOM05D011973 ORTHO05D014038 2.1e-32 143.7 143 55.9
CARHR114330 Cardamine hirsuta HOM05D011973 ORTHO05D014038 3.2e-25 119.8 180 40.0
BcaB03g12308 Brassica carinata HOM05D011973 ORTHO05D014038 4.3e-22 109.4 237 37.1
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 1.8e-20 104.0 117 46.2
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 1.8e-20 104.0 117 46.2
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 4.1e-20 102.8 117 45.3
Sp7g35720 Schrenkiella parvula HOM05D011973 ORTHO05D014038 5.3e-20 102.4 119 44.5
BcaB03g12310 Brassica carinata HOM05D011973 ORTHO05D014038 2.0e-19 100.5 117 45.3
BcaC01g00349 Brassica carinata HOM05D011973 ORTHO05D014038 2.0e-19 100.5 117 45.3
AL7G12560 Arabidopsis lyrata HOM05D011973 ORTHO05D014038 4.5e-19 99.4 89 58.4
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 4.5e-19 99.4 150 40.0
Carub.0006s3104 Capsella rubella HOM05D011973 ORTHO05D014038 1.5e-14 84.3 132 37.9
THA.LOC104804176 Tarenaya hassleriana HOM05D000160 ORTHO05D001344 5.5e-09 65.9 125 34.4
TWI74G1488 Tripterygium wilfordii HOM05D000160 ORTHO05D001344 5.5e-09 65.9 148 33.1
TWI53G1224 Tripterygium wilfordii HOM05D000160 ORTHO05D001344 1.6e-08 64.3 123 32.5
TPR.G2892 Trifolium pratense HOM05D000160 ORTHO05D001344 1.1e-06 58.2 148 32.4
Carub.0006s0811 Capsella rubella HOM05D000160 ORTHO05D001344 1.5e-06 57.8 143 34.3
Sp2g27450 Schrenkiella parvula HOM05D000160 ORTHO05D001344 1.5e-06 57.8 140 32.1
DCAR_029659 Daucus carota HOM05D000160 ORTHO05D001344 2.0e-06 57.4 127 34.6
C03p61920 Brassica napus HOM05D000160 ORTHO05D001344 2.6e-06 57.0 143 32.2
BolC3t18451H Brassica oleracea HOM05D000160 ORTHO05D001344 2.6e-06 57.0 143 32.2
QL11p024169 Quercus lobata HOM05D000160 ORTHO05D001344 3.3e-06 56.6 122 32.0
Lalb_Chr09g0326021 Lupinus albus HOM05D000160 ORTHO05D001344 4.4e-06 56.2 118 31.4
Medtr4g093930 Medicago truncatula HOM05D000160 ORTHO05D001344 4.4e-06 56.2 138 33.3
Lalb_Chr15g0090331 Lupinus albus HOM05D000160 ORTHO05D001344 5.7e-06 55.8 126 34.1
Aa31LG1G17540 Aethionema arabicum HOM05D000160 ORTHO05D001344 9.7e-06 55.1 120 35.0


User provided reference genes

Program Settings