Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G11510 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 1.7e-44 182.2 86 100.0
AL6G46040 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 2.0e-29 132.1 86 74.4
AL6G46060 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 3.1e-22 108.2 56 82.1
Carub.0006s3050 Capsella rubella HOM05D008965 ORTHO05D011533 4.7e-18 94.4 75 65.3
Carub.0006s3055 Capsella rubella HOM05D008965 ORTHO05D011533 1.1e-14 83.2 77 61.0
AL3G14860 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 9.1e-14 80.1 87 54.0
BcaC05g29912 Brassica carinata HOM05D008965 ORTHO05D011533 7.7e-13 77.0 80 53.8
BcaC05g29913 Brassica carinata HOM05D008965 ORTHO05D011533 7.7e-13 77.0 80 53.8
BolC5t34910H Brassica oleracea HOM05D008965 ORTHO05D011533 7.7e-13 77.0 80 53.8
AT3G04735 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 1.3e-12 76.3 91 51.6
Carub.0006s3053 Capsella rubella HOM05D008965 ORTHO05D011533 5.0e-12 74.3 75 54.7
C05p62550 Brassica napus HOM05D008965 ORTHO05D011533 6.6e-12 73.9 80 52.5
A05p42840 Brassica napus HOM05D008965 ORTHO05D011533 1.1e-11 73.2 83 51.8
BraA05t22969Z Brassica rapa HOM05D008965 ORTHO05D011533 1.1e-11 73.2 83 51.8
A05p42830 Brassica napus HOM05D008965 ORTHO05D011533 1.5e-11 72.8 88 52.3
BcaC05g29914 Brassica carinata HOM05D008965 ORTHO05D011533 1.9e-11 72.4 83 51.8
C05p62560 Brassica napus HOM05D008965 ORTHO05D011533 1.9e-11 72.4 83 51.8
BolC5t34911H Brassica oleracea HOM05D008965 ORTHO05D011533 5.5e-11 70.9 83 51.8
BcaB03g11925 Brassica carinata HOM05D008965 ORTHO05D011533 7.2e-11 70.5 89 48.3
C09p50450 Brassica napus HOM05D008965 ORTHO05D011533 9.5e-11 70.1 83 51.8
BolC9t57902H Brassica oleracea HOM05D008965 ORTHO05D011533 9.5e-11 70.1 83 51.8
Carub.0006s3052 Capsella rubella HOM05D008965 ORTHO05D011533 1.4e-09 66.2 83 43.4
Aa31sc17G30 Aethionema arabicum HOM05D008965 ORTHO05D011533 4.0e-09 64.7 81 50.6
Aa31sc41G40 Aethionema arabicum HOM05D008965 ORTHO05D011533 5.2e-09 64.3 71 53.5
Aa31sc41G90 Aethionema arabicum HOM05D008965 ORTHO05D011533 2.0e-08 62.4 73 53.4
BcaC05g30176 Brassica carinata HOM05D008965 ORTHO05D011533 2.0e-08 62.4 86 47.7
A08p28330 Brassica napus HOM05D008965 ORTHO05D027579 1.7e-07 59.3 87 41.4
Thhalv10022213m.g Eutrema salsugineum HOM05D008965 ORTHO05D011533 2.2e-07 58.9 86 45.3
C08p21750 Brassica napus HOM05D008965 ORTHO05D027579 3.7e-07 58.2 89 41.6
BcaC05g30175 Brassica carinata HOM05D008965 ORTHO05D011533 6.3e-07 57.4 86 50.0
AT1G23147 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 3.1e-06 55.1 88 42.0
Gohir.D05G086150 Gossypium hirsutum HOM05D062506 ORTHO05D047368 5.4e-06 54.3 62 45.2
Carub.0001s2270 Capsella rubella HOM05D008965 ORTHO05D011533 7.0e-06 53.9 85 44.7


User provided reference genes

Program Settings