Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G11393 Arabidopsis thaliana HOM05D025523 ORTHO05D023653 3.6e-41 171.0 79 100.0
AL6G45810 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 1.4e-37 159.1 79 93.7
AL4G15710 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 9.2e-29 129.8 79 68.4
CARHR179090 Cardamine hirsuta HOM05D025523 ORTHO05D023653 1.3e-27 125.9 80 76.2
CARHR131460 Cardamine hirsuta HOM05D025523 ORTHO05D023653 1.1e-26 122.9 80 73.8
BolC1t05675H Brassica oleracea HOM05D011267 ORTHO05D013190 2.9e-14 81.6 76 50.0
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 1.1e-13 79.7 78 50.0
BraA01t04490Z Brassica rapa HOM05D011267 ORTHO05D013190 5.4e-13 77.4 76 48.7
AL3G16430 Arabidopsis lyrata HOM05D011267 ORTHO05D013190 6.0e-12 73.9 76 44.7
AT3G05727 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 1.0e-11 73.2 76 44.7
CARHR080190 Cardamine hirsuta HOM05D011267 ORTHO05D013190 9.6e-10 66.6 76 43.4
AT3G05730 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 7.6e-07 57.0 84 38.1
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 4.9e-06 54.3 79 41.8
Carub.0003s0509 Capsella rubella HOM05D011267 ORTHO05D013190 6.4e-06 53.9 78 39.7


User provided reference genes

Program Settings