Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 8.4e-199 696.8 351 100.0
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 3.5e-189 664.8 351 94.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 3.7e-186 654.8 347 95.1
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.5e-184 647.9 346 94.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 4.6e-181 637.9 346 93.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 2.3e-180 635.6 346 92.5
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 2.3e-180 635.6 346 92.5
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 3.0e-180 635.2 346 92.5
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.1e-179 633.3 346 91.9
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 9.7e-179 630.2 346 91.9
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.3e-178 629.8 346 91.6
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.8e-178 628.6 351 90.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.8e-172 609.4 346 85.5
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.1e-157 559.3 349 79.1
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.4e-153 546.6 346 78.0
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 3.1e-153 545.4 354 76.6
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 4.1e-153 545.0 342 78.4
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 7.0e-153 544.3 348 77.3
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.7e-152 542.3 343 79.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.5e-152 541.6 343 76.1
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 5.9e-152 541.2 347 77.2
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.2e-151 539.3 342 78.9
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.2e-151 539.3 346 77.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 2.9e-151 538.9 344 76.2
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 3.8e-151 538.5 346 76.6
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 5.0e-151 538.1 351 76.4
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 8.5e-151 537.3 343 76.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.1e-150 537.0 335 79.1
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.9e-150 536.2 348 76.7
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.9e-150 536.2 353 75.6
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.9e-150 536.2 343 78.4
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.9e-150 536.2 343 76.1
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 4.2e-150 535.0 342 76.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.2e-149 533.5 343 74.3
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.2e-149 533.5 342 76.3
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.2e-149 533.5 351 74.6
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.6e-149 533.1 342 76.3
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.6e-149 533.1 332 77.4
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.1e-149 532.7 342 78.1
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 2.7e-149 532.3 348 75.0
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.7e-149 532.3 336 78.3
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.7e-149 532.3 345 75.7
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 3.6e-149 531.9 341 76.0
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 3.6e-149 531.9 332 78.3
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 6.1e-149 531.2 347 76.7
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 8.0e-149 530.8 378 72.5
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 2.3e-148 529.3 346 75.1
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 3.0e-148 528.9 346 75.4
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 8.8e-148 527.3 344 76.2
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 8.8e-148 527.3 345 75.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.5e-147 526.6 347 74.1
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.5e-147 526.6 358 75.1
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.0e-147 526.2 347 74.4
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.7e-147 524.6 342 74.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 5.7e-147 524.6 321 78.8
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.7e-146 523.1 338 76.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 3.7e-146 521.9 350 74.9
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 4.8e-146 521.5 350 73.1
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.3e-146 521.2 349 73.6
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.1e-145 520.4 343 73.5
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 2.4e-145 519.2 343 73.2
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 5.4e-145 518.1 335 74.3
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 9.1e-145 517.3 356 71.3
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.0e-144 516.2 343 72.9
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.7e-144 515.8 350 71.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 7.7e-144 514.2 341 74.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.0e-143 513.8 340 73.2
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 2.9e-143 512.3 359 71.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 8.6e-143 510.8 343 73.8
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 4.2e-142 508.4 306 79.4
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 9.5e-142 507.3 307 79.5
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 9.5e-142 507.3 345 71.9
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.4e-140 503.4 340 71.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.2e-139 500.4 346 69.4
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.0e-139 499.6 346 69.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.4e-137 493.4 338 70.7
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.4e-137 493.4 352 68.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.4e-137 491.5 343 72.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 5.6e-134 481.5 347 71.8
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.6e-131 472.6 347 66.9
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 8.3e-130 467.6 339 68.1
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 1.1e-129 467.2 329 66.9
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.7e-127 459.9 344 67.7
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.0e-127 458.4 340 64.1
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.3e-126 455.3 263 84.0
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 2.8e-117 426.0 255 80.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.8e-117 426.0 336 61.3
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.5e-115 420.2 341 63.9
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 4.9e-114 415.2 306 64.4
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 9.2e-113 411.0 344 64.0
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.6e-112 410.2 366 63.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.9e-105 386.7 229 80.8
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.6e-104 383.6 531 45.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.3e-103 380.6 343 58.6
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.1e-100 369.4 344 59.3
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 6.9e-100 368.2 222 80.2
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 7.1e-97 358.2 211 82.5
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.3e-97 357.8 248 73.4
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.4e-84 317.4 190 79.5
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 5.5e-81 305.4 305 55.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.8e-74 282.7 163 79.1
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 4.6e-72 275.8 387 40.3
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 4.6e-72 275.8 176 78.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.2e-69 266.9 227 57.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 5.7e-62 242.3 327 42.2
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.6e-59 233.4 142 76.1
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.3e-53 214.5 127 83.5
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 9.4e-49 198.4 326 37.7
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.3e-45 188.0 343 34.4
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.7e-45 186.4 126 70.6
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.2e-38 164.9 98 73.5
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-36 158.3 97 77.3
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.0e-34 149.4 84 82.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.1e-25 121.7 78 73.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 9.5e-25 118.6 63 82.5
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.1e-16 90.9 76 59.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.2e-15 86.3 56 82.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.0e-10 70.5 38 73.7
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 6.8e-07 59.3 275 23.6
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 5.8e-06 56.2 63 42.9
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 9.8e-06 55.5 142 31.0


User provided reference genes

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