Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 7.2e-270 933.3 474 100.0
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.9e-241 839.0 474 90.5
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.2e-237 826.2 475 88.4
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.6e-237 825.9 475 88.4
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 4.7e-237 824.3 475 89.5
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 1.7e-231 805.8 475 86.5
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 1.7e-231 805.8 475 86.5
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 1.7e-231 805.8 475 86.5
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 8.6e-231 803.5 475 86.1
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 1.9e-230 802.4 475 86.1
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 9.5e-230 800.0 475 88.6
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.7e-223 779.2 477 84.1
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.5e-206 723.0 575 69.0
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.5e-203 713.0 476 76.5
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.3e-202 709.9 480 75.8
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 2.0e-195 686.0 480 73.1
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 2.5e-193 679.1 480 72.9
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 7.9e-192 674.1 480 71.9
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 3.0e-191 672.2 480 72.1
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 1.1e-190 670.2 477 71.7
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 2.5e-190 669.1 477 71.7
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 3.3e-190 668.7 480 71.7
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 5.7e-190 667.9 474 71.5
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 7.4e-190 667.5 478 71.5
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 9.6e-190 667.2 480 71.7
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.3e-189 666.8 477 72.1
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.4e-188 662.5 480 70.8
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 3.1e-188 662.1 480 70.6
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 6.9e-188 661.0 478 71.1
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 9.0e-188 660.6 480 71.2
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 1.5e-187 659.8 480 70.4
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 3.4e-187 658.7 477 70.6
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.3e-186 656.8 480 71.2
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.3e-186 656.8 473 71.2
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.9e-186 655.6 480 71.0
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 3.8e-186 655.2 480 71.0
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 6.5e-186 654.4 473 71.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 9.3e-185 650.6 475 70.3
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 9.3e-185 650.6 479 69.3
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.2e-184 650.2 480 70.0
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 6.1e-184 647.9 479 70.6
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 6.1e-184 647.9 496 67.7
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 3.9e-183 645.2 478 70.9
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.5e-182 643.3 480 69.0
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.9e-182 642.9 476 70.4
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 4.3e-182 641.7 477 68.8
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.3e-181 640.2 480 70.0
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.3e-181 640.2 480 69.0
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.6e-181 639.8 480 68.8
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.8e-181 639.0 480 69.4
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 3.7e-181 638.6 479 70.1
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 6.3e-181 637.9 476 68.3
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 6.3e-181 637.9 479 69.7
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 2.4e-180 636.0 516 65.3
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 5.3e-180 634.8 478 70.5
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 6.9e-180 634.4 476 68.3
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 9.1e-180 634.0 480 67.7
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 5.9e-179 631.3 485 67.2
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 1.0e-178 630.6 478 70.3
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 1.0e-178 630.6 485 66.6
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 1.7e-178 629.8 485 67.0
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 3.8e-178 628.6 477 69.2
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 5.0e-178 628.2 481 68.0
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 6.5e-178 627.9 485 67.2
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 8.5e-178 627.5 481 67.8
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 1.1e-177 627.1 482 67.8
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 1.9e-177 626.3 477 68.6
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.1e-174 617.1 479 65.8
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 4.4e-174 615.1 479 66.6
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 5.7e-174 614.8 479 66.0
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 7.4e-174 614.4 479 66.8
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 5.3e-172 608.2 479 65.3
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 6.9e-172 607.8 480 66.5
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 2.2e-170 602.8 473 65.8
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 8.5e-170 600.9 511 62.0
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 8.5e-170 600.9 477 67.1
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 1.9e-169 599.7 478 65.3
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 1.9e-169 599.7 422 72.7
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.2e-168 597.0 476 64.7
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 7.9e-168 594.3 478 66.1
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.6e-166 589.3 479 64.9
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 9.7e-166 587.4 414 71.5
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 5.9e-163 578.2 487 62.2
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 1.0e-159 567.4 474 65.2
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 5.7e-158 561.6 535 58.3
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 9.7e-158 560.8 478 63.0
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 1.3e-157 560.5 477 62.9
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 6.3e-157 558.1 423 67.8
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 2.7e-155 552.7 476 61.6
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 1.0e-154 550.8 474 61.8
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.9e-153 546.6 483 60.5
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 1.9e-153 546.6 478 61.5
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 1.6e-152 543.5 409 68.9
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 2.1e-152 543.1 497 59.6
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 6.8e-151 538.1 376 73.4
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.5e-150 537.0 377 71.9
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.5e-150 534.6 476 60.5
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 3.5e-147 525.8 480 60.2
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.5e-145 519.6 383 70.2
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.4e-142 509.2 443 63.7
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 8.3e-141 504.6 377 66.6
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 1.9e-137 493.4 484 54.8
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 5.4e-132 475.3 339 69.6
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 3.1e-127 459.5 477 54.3
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.5e-121 439.9 314 73.2
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 5.4e-116 422.2 376 56.6
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 6.6e-114 415.2 315 68.9
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 4.0e-111 406.0 810 35.6
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 6.8e-111 405.2 346 61.6
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.3e-109 401.0 456 49.6
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 6.4e-109 398.7 449 49.9
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 6.0e-107 392.1 456 48.7
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.3e-106 390.2 477 48.0
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 6.6e-106 388.7 447 49.4
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 3.3e-105 386.3 471 47.3
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 4.3e-105 386.0 447 49.0
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 9.6e-105 384.8 453 47.9
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.1e-103 381.3 448 48.4
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 5.1e-98 362.5 448 48.0
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 3.3e-97 359.8 405 50.9
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 4.3e-97 359.4 371 53.1
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 5.6e-97 359.0 370 52.7
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 3.6e-96 356.3 444 48.2
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 2.6e-94 350.1 405 50.6
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 5.1e-90 335.9 246 70.7
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 3.1e-87 326.6 228 69.7
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 3.4e-86 323.2 498 41.2
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 4.3e-81 306.2 453 43.5
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 2.8e-80 303.5 240 64.2
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 2.2e-69 267.3 250 56.4
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 3.8e-69 266.5 489 36.6
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.2e-52 210.3 323 43.0
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 2.6e-49 200.7 213 52.6
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.1e-47 195.3 191 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 2.1e-43 181.0 446 30.9
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.4e-42 178.3 204 47.1
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 1.8e-39 167.9 515 28.7
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 1.3e-24 118.6 102 64.7
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 9.2e-23 112.5 106 61.3
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 6.8e-18 96.3 151 39.1
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.7e-14 84.3 90 47.8
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 1.1e-07 62.4 61 63.9
PRCOL_00005117 Prasinoderma coloniale HOM05D001663 ORTHO05D005717 2.7e-06 57.8 511 21.7


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