Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.6e-68 262.7 135 100.0
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.1e-57 225.7 125 93.6
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 8.3e-54 213.8 125 88.8
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.2e-49 199.9 135 80.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 7.5e-47 190.7 132 79.5
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 8.3e-46 187.2 131 79.4
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 3.2e-45 185.3 134 76.9
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.5e-44 181.8 134 76.1
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 1.0e-43 180.3 134 75.4
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.1e-41 172.6 137 69.3
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 1.2e-39 166.8 112 77.7
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 2.0e-39 166.0 129 68.2
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 5.8e-39 164.5 105 80.0
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.7e-38 162.9 125 70.4
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 2.9e-38 162.2 129 70.5
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.9e-38 162.2 108 76.9
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 3.8e-38 161.8 110 76.4
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 3.8e-38 161.8 110 76.4
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 3.8e-38 161.8 128 69.5
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 6.4e-38 161.0 125 71.2
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 8.4e-38 160.6 100 80.0
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 1.4e-37 159.8 110 73.6
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.9e-37 159.5 101 78.2
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.9e-37 159.5 101 79.2
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 4.1e-37 158.3 111 71.2
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 5.4e-37 157.9 121 72.7
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 7.1e-37 157.5 127 65.4
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 9.2e-37 157.1 132 68.2
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 9.2e-37 157.1 139 64.7
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 9.2e-37 157.1 119 69.7
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.2e-36 156.8 129 68.2
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.6e-36 156.4 102 78.4
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.1e-36 156.0 104 73.1
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 2.7e-36 155.6 104 76.0
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.7e-36 155.6 120 70.0
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.5e-36 155.2 132 67.4
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 3.5e-36 155.2 101 74.3
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.5e-36 155.2 129 65.1
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 3.5e-36 155.2 129 63.6
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 4.6e-36 154.8 128 66.4
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 4.6e-36 154.8 132 65.9
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 4.6e-36 154.8 126 67.5
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 4.6e-36 154.8 99 77.8
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 7.8e-36 154.1 106 75.5
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 7.8e-36 154.1 102 77.5
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 1.3e-35 153.3 125 66.4
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 1.7e-35 152.9 113 70.8
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.7e-35 152.9 104 72.1
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.7e-35 152.9 104 72.1
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.3e-35 152.5 111 71.2
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 3.0e-35 152.1 125 65.6
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 3.9e-35 151.8 112 75.0
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.9e-35 151.8 105 76.2
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 6.6e-35 151.0 115 74.8
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 8.6e-35 150.6 110 68.2
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.1e-34 150.2 128 64.8
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 1.9e-34 149.4 108 73.1
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.5e-34 149.1 110 68.2
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.5e-34 149.1 105 72.4
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.3e-34 148.7 124 62.9
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 4.3e-34 148.3 123 66.7
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 5.6e-34 147.9 107 68.2
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 7.3e-34 147.5 93 77.4
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 9.6e-34 147.1 119 68.1
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.2e-33 146.7 95 74.7
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.2e-33 146.7 106 68.9
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 2.8e-33 145.6 106 67.9
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 3.6e-33 145.2 114 65.8
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 4.7e-33 144.8 95 73.7
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.8e-32 142.9 89 79.8
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 2.4e-32 142.5 95 72.6
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 2.4e-32 142.5 130 60.0
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.4e-32 142.5 120 61.7
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 2.0e-31 139.4 110 63.6
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 5.8e-31 137.9 110 63.6
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 6.4e-30 134.4 122 57.4
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 3.2e-29 132.1 98 64.3
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.2e-28 130.2 82 76.8
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 2.1e-28 129.4 84 79.8
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.1e-28 129.4 92 67.4
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.8e-28 127.5 82 75.6
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.7e-27 126.3 113 61.1
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 3.0e-27 125.6 114 59.6
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 6.6e-27 124.4 105 63.8
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.1e-26 123.6 101 64.4
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.9e-26 122.9 82 75.6
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.5e-26 122.5 109 58.7
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 4.3e-26 121.7 102 62.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 4.3e-26 121.7 107 62.6
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 7.3e-26 120.9 106 64.2
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.3e-26 120.9 99 63.6
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.3e-25 120.2 83 71.1
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 1.3e-25 120.2 106 65.1
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 2.1e-25 119.4 89 60.7
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 4.0e-24 115.2 125 56.8
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.0e-23 112.8 77 70.1
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.6e-23 112.5 88 64.8
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.6e-23 112.5 95 58.9
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 9.9e-23 110.5 117 53.8
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.2e-20 103.6 54 92.6
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 4.6e-20 101.7 64 75.0
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.5e-18 96.7 106 50.0
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 1.4e-13 80.1 57 73.7
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 9.3e-13 77.4 109 43.1
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 3.0e-11 72.4 118 34.7
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 3.3e-10 68.9 43 76.7
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-06 56.6 44 63.6


User provided reference genes

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