Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G07455 Arabidopsis thaliana HOM05D003007 ORTHO05D080942 2.8e-42 174.9 88 100.0
CARHR170780 Cardamine hirsuta HOM05D003007 ORTHO05D003417 2.0e-11 72.4 42 78.6
CARHR170790 Cardamine hirsuta HOM05D003007 ORTHO05D003417 2.0e-11 72.4 42 78.6
Carub.0005s2716 Capsella rubella HOM05D003007 ORTHO05D003417 2.5e-11 72.0 42 78.6
Sp5g02790 Schrenkiella parvula HOM05D003007 ORTHO05D003417 4.3e-11 71.2 42 76.2
Thhalv10006148m.g Eutrema salsugineum HOM05D003007 ORTHO05D003417 1.3e-10 69.7 42 76.2
BcaB02g07418 Brassica carinata HOM05D003007 ORTHO05D003417 2.2e-10 68.9 42 73.8
BraA04t15885Z Brassica rapa HOM05D003007 ORTHO05D003417 3.7e-10 68.2 42 71.4
C06p26680 Brassica napus HOM05D003007 ORTHO05D003417 4.8e-10 67.8 59 57.6
BolC6t37830H Brassica oleracea HOM05D003007 ORTHO05D003417 4.8e-10 67.8 59 57.6
A07p25070 Brassica napus HOM05D003007 ORTHO05D003417 6.3e-10 67.4 59 57.6
BraA07t30147Z Brassica rapa HOM05D003007 ORTHO05D003417 6.3e-10 67.4 59 57.6
AT3G60440 Arabidopsis thaliana HOM05D003007 ORTHO05D003417 8.2e-10 67.0 42 73.8
Sp5g14680 Schrenkiella parvula HOM05D003007 ORTHO05D003417 8.2e-10 67.0 42 71.4
A04p01610 Brassica napus HOM05D003007 ORTHO05D003417 1.1e-09 66.6 42 69.0
C04p32150 Brassica napus HOM05D003007 ORTHO05D003417 1.1e-09 66.6 42 69.0
BolC4t24765H Brassica oleracea HOM05D003007 ORTHO05D003417 1.1e-09 66.6 42 69.0
BcaC02g10155 Brassica carinata HOM05D003007 ORTHO05D003417 3.1e-09 65.1 42 66.7
BcaB02g08168 Brassica carinata HOM05D003007 ORTHO05D003417 4.1e-09 64.7 42 66.7
BcaB02g07419 Brassica carinata HOM05D003007 ORTHO05D003417 1.5e-08 62.8 42 66.7
BcaC08g45051 Brassica carinata HOM05D003007 ORTHO05D003417 1.5e-08 62.8 42 66.7
AL5G42330 Arabidopsis lyrata HOM05D003007 ORTHO05D003417 4.5e-08 61.2 42 69.0
BcaC08g45059 Brassica carinata HOM05D003007 ORTHO05D003417 2.2e-07 58.9 54 55.6
BolC6t37844H Brassica oleracea HOM05D003007 ORTHO05D003417 6.5e-07 57.4 54 53.7


User provided reference genes

Program Settings