Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G06688 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 0.0e+00 1158.3 611 100.0
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 9.1e-124 448.4 703 44.7
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.8e-111 407.5 646 45.0
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.7e-107 393.7 858 38.0
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-99 366.3 636 40.6
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.6e-98 362.5 700 38.9
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-97 360.5 636 39.8
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-97 360.5 635 40.2
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-96 358.2 636 41.2
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-96 358.2 649 39.3
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.6e-96 357.8 606 40.4
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.6e-96 356.7 606 40.8
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.0e-95 353.2 693 38.5
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.2e-95 352.8 693 38.2
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.2e-95 352.8 641 40.2
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-94 350.9 702 37.7
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-93 347.8 678 38.2
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.4e-92 342.8 606 39.3
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-87 328.6 657 38.4
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.1e-87 327.0 588 41.2
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.2e-79 299.7 678 36.4
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-70 271.6 667 35.1
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-69 268.5 263 56.7
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.1e-63 247.3 650 34.8
AT5G33806 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.5e-54 218.4 196 60.2
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.4e-53 213.0 528 35.6
AL77U10020 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.3e-52 209.1 538 33.5
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-50 204.9 332 42.2
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.3e-50 204.5 320 43.4
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.0e-34 151.0 91 83.5
AT5G35604 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.3e-33 147.5 284 37.7
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.3e-26 124.8 253 35.2
AT3G43150 Arabidopsis thaliana HOM05D008528 ORTHO05D011959 6.3e-24 116.7 78 75.6
AT3G32190 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.5e-20 104.8 176 43.2
AT3G32200 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.8e-18 98.6 133 49.6
AL3G38150 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 4.8e-16 90.5 77 59.7
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 8.2e-16 89.7 186 31.2
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-15 89.4 441 25.6
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.4e-15 89.0 80 48.8
AL8G20440 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 5.3e-15 87.0 77 57.1
AT3G32150 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 5.3e-15 87.0 167 40.1
AL8G13650 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 6.9e-15 86.7 77 59.7
AL8G10150 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 9.1e-15 86.3 156 42.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 9.1e-15 86.3 272 27.9
AL1G61980 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 2.6e-14 84.7 79 58.2
AL1G65170 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 2.6e-14 84.7 79 58.2
AL8G10140 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 1.3e-13 82.4 77 57.1
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-13 82.4 347 27.4
AL1G57340 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 2.2e-13 81.6 79 57.0
AL2G18410 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 2.9e-13 81.3 79 55.7
AT3G33393 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.9e-13 81.3 65 61.5
AL6G42700 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 3.8e-13 80.9 79 58.2
AL2G23350 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 5.0e-13 80.5 79 55.7
AL77U10030 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 5.0e-13 80.5 79 57.0
AL8G45400 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 5.0e-13 80.5 79 58.2
AL9U10220 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 5.0e-13 80.5 79 57.0
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.1e-12 79.3 74 45.9
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-12 78.2 234 28.2
AL5G23170 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 4.2e-12 77.4 78 59.0
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 5.5e-12 77.0 79 43.0
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.2e-12 76.6 85 41.2
AL5G12230 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 1.2e-11 75.9 79 53.2
AL5G19640 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 1.2e-11 75.9 77 53.2
AT4G07932 Arabidopsis thaliana HOM05D008528 ORTHO05D081169 2.1e-11 75.1 55 67.3
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 2.1e-11 75.1 319 29.2
AT3G32160 Arabidopsis thaliana HOM05D008528 ORTHO05D011959 3.6e-11 74.3 49 75.5
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 3.6e-11 74.3 83 43.4
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 6.1e-11 73.6 83 43.4
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.1e-11 73.6 83 38.6
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 2.3e-10 71.6 83 42.2
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 5.1e-10 70.5 83 41.0
AT4G08097 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.7e-10 70.1 135 42.2
AT3G33293 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.5e-09 68.9 125 44.8
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 2.0e-09 68.6 416 25.0
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.7e-09 67.0 83 38.6
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.4e-09 66.6 70 40.0
CARHR153510 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.4e-09 66.6 65 44.6
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.3e-08 65.9 85 36.5
CARHR150680 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.8e-08 64.7 63 49.2
CARHR181790 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.7e-08 64.3 63 47.6
AL6G47380 Arabidopsis lyrata HOM05D008528 ORTHO05D011959 8.2e-08 63.2 78 47.4
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-07 62.4 231 25.5
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 1.8e-07 62.0 304 25.0
CARHR181090 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.8e-07 62.0 51 49.0
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 2.4e-07 61.6 397 24.2
AL7G45790 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 4.1e-07 60.8 88 36.4
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 4.1e-07 60.8 145 29.7
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.0e-07 60.1 143 29.4
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 9.1e-07 59.7 137 32.1
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 1.2e-06 59.3 88 35.2
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.5e-06 58.9 53 50.9
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 2.0e-06 58.5 326 25.5
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 2.6e-06 58.2 88 35.2
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 4.5e-06 57.4 118 29.7
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 5.9e-06 57.0 77 33.8


User provided reference genes

Program Settings