Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.6e-200 702.6 356 100.0
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 8.0e-189 663.7 356 94.1
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 8.0e-189 663.7 356 92.7
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 4.3e-182 641.3 356 90.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.0e-180 634.8 356 89.6
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 8.9e-180 633.6 356 87.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 1.2e-179 633.3 356 87.6
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.2e-179 633.3 356 87.9
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.6e-179 632.1 356 87.6
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.2e-178 629.0 357 89.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.1e-173 612.5 356 85.1
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.1e-161 573.5 367 78.5
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.4e-161 573.2 318 88.1
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.3e-148 528.1 358 73.2
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 3.4e-147 525.4 358 74.9
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.2e-146 522.7 358 73.2
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 3.8e-146 521.9 356 74.2
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 4.6e-144 515.0 358 74.0
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.0e-143 513.8 360 71.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.3e-143 512.7 337 77.2
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 8.7e-143 510.8 351 72.4
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.7e-143 510.8 356 70.5
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.5e-142 510.0 350 72.9
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.5e-142 510.0 356 74.7
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.9e-142 509.6 357 70.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.9e-142 509.6 356 70.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.3e-142 508.8 351 72.1
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 5.6e-142 508.1 356 70.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 5.6e-142 508.1 354 72.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 5.6e-142 508.1 351 72.1
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 7.3e-142 507.7 354 72.9
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.3e-142 507.7 350 72.6
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.3e-141 506.9 357 69.7
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.6e-141 506.5 356 70.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 2.8e-141 505.8 358 70.4
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 3.6e-141 505.4 351 71.2
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 3.6e-141 505.4 356 71.3
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.8e-140 503.1 358 70.7
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 5.8e-139 498.0 356 69.1
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 9.9e-139 497.3 360 70.0
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.7e-138 496.5 351 70.1
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.8e-138 495.4 360 68.6
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 3.8e-138 495.4 355 69.0
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 3.8e-138 495.4 360 67.5
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.9e-137 493.0 359 69.1
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 7.1e-137 491.1 328 74.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.6e-136 490.0 360 69.2
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 7.9e-136 487.6 355 68.2
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.3e-135 486.9 360 67.2
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.3e-135 486.9 360 67.5
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.3e-135 486.9 357 68.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.3e-135 486.1 362 67.1
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.3e-135 486.1 362 67.1
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.3e-135 486.1 360 68.1
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 3.0e-135 485.7 358 67.0
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 3.0e-135 485.7 335 71.3
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.9e-135 485.3 360 68.3
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 3.9e-135 485.3 361 67.6
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 5.1e-135 485.0 358 66.5
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 6.7e-135 484.6 356 67.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.1e-134 483.8 361 66.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.9e-134 483.0 352 69.3
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 2.5e-134 482.6 353 67.7
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.5e-134 482.6 360 67.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.3e-134 482.3 353 68.0
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.3e-134 482.3 334 74.3
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.3e-134 482.3 359 67.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.3e-134 481.9 359 66.9
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 5.6e-134 481.5 358 68.7
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.3e-133 480.3 361 66.5
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.1e-133 479.6 356 68.0
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 4.8e-133 478.4 374 67.4
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.4e-132 476.9 352 67.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.4e-132 476.9 353 65.7
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.0e-132 475.3 348 68.4
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 5.8e-131 471.5 374 66.3
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 7.6e-131 471.1 352 67.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.3e-130 470.3 357 65.5
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.7e-130 469.9 349 64.8
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.7e-130 469.9 375 66.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 8.4e-130 467.6 361 66.8
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.5e-129 466.1 328 72.3
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 7.9e-128 461.1 354 64.7
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.8e-127 459.9 356 65.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 3.3e-126 455.7 360 63.6
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.3e-126 455.3 354 65.3
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 5.7e-126 454.9 355 62.8
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.3e-125 453.8 360 66.9
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.1e-124 450.7 354 64.1
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.1e-124 450.7 353 63.5
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.1e-124 449.1 435 55.9
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.5e-123 446.8 355 65.4
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.5e-123 445.3 353 63.7
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 7.2e-121 438.0 314 71.0
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.1e-119 431.8 401 57.9
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.5e-118 430.3 336 64.9
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 4.8e-117 425.2 287 73.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.3e-117 424.9 356 59.8
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 8.2e-117 424.5 419 55.8
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 8.5e-114 414.5 313 67.1
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.4e-113 413.7 289 70.9
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 6.7e-111 404.8 287 70.4
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.8e-109 398.7 274 74.1
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 8.2e-109 397.9 319 63.3
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.6e-107 392.9 275 70.2
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.2e-104 384.0 305 65.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.8e-103 377.9 357 55.5
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 8.8e-103 377.9 354 57.1
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 4.8e-101 372.1 350 54.6
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 8.8e-95 351.3 261 68.2
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 6.3e-93 345.1 323 58.5
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 3.0e-87 326.2 262 63.0
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 4.0e-87 325.9 255 63.9
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 3.7e-85 319.3 351 49.0
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 3.6e-80 302.8 300 51.7
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.7e-70 268.9 443 38.1
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-65 254.2 353 45.6
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 3.2e-60 236.5 352 42.6
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-53 214.5 175 66.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 8.3e-53 211.8 271 49.8
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.3e-50 203.8 351 38.5
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-49 200.7 240 52.1
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-46 189.5 210 53.8
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 4.9e-45 186.0 180 60.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.4e-45 185.3 180 59.4
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 3.6e-40 169.9 244 47.1
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 7.6e-30 135.6 108 61.1
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 6.4e-21 105.9 197 39.1
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 3.9e-18 96.7 102 52.0
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 2.9e-13 80.5 70 55.7
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 3.8e-13 80.1 49 75.5
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 7.9e-11 72.4 62 58.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.3e-08 65.1 35 80.0
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 5.3e-07 59.7 83 39.8


User provided reference genes

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