Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 4.4e-297 1023.8 519 100.0
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 5.8e-281 970.3 526 93.9
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 4.3e-276 954.1 526 93.0
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 8.7e-269 929.9 527 90.3
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 5.3e-266 920.6 533 89.1
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 1.3e-264 916.0 530 88.5
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.9e-263 912.1 530 88.3
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 1.8e-253 879.0 520 87.3
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 1.6e-246 855.9 530 83.6
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 3.6e-246 854.7 530 83.6
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 3.6e-246 854.7 530 83.6
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 1.4e-242 842.8 529 82.6
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 2.9e-240 835.1 486 88.7
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 5.4e-234 814.3 533 77.7
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 1.7e-208 729.6 529 70.5
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 1.5e-204 716.5 537 69.1
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 1.3e-203 713.4 524 69.8
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 2.9e-203 712.2 528 69.7
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 2.4e-202 709.1 522 70.1
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 3.2e-202 708.8 527 69.6
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 7.1e-202 707.6 531 69.9
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 2.1e-201 706.1 522 70.5
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 6.0e-201 704.5 522 70.5
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 6.0e-201 704.5 527 69.6
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 1.0e-200 703.7 529 68.4
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 1.3e-200 703.4 529 68.6
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 2.3e-200 702.6 534 68.4
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 3.0e-200 702.2 529 69.0
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 3.3e-199 698.7 529 68.8
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 4.3e-199 698.4 519 69.9
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 7.3e-199 697.6 531 68.4
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 1.6e-198 696.4 539 68.6
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 1.4e-197 693.3 532 68.8
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 2.6e-196 689.1 533 67.9
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 3.4e-196 688.7 523 68.5
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 7.6e-196 687.6 531 67.6
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 9.9e-196 687.2 527 66.8
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 4.9e-195 684.9 548 65.7
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 1.9e-194 682.9 525 67.6
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.2e-194 682.2 525 67.4
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 4.1e-194 681.8 533 66.6
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 4.1e-194 681.8 525 67.4
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 1.6e-193 679.9 524 68.3
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 2.7e-193 679.1 531 65.9
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 1.3e-192 676.8 517 68.9
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 3.9e-192 675.2 520 68.1
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 1.1e-191 673.7 487 70.4
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 2.5e-191 672.5 518 67.8
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 2.5e-191 672.5 492 70.1
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 4.3e-191 671.8 557 63.6
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 5.6e-191 671.4 499 68.7
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 7.3e-191 671.0 532 66.5
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 3.6e-190 668.7 525 66.7
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 6.8e-189 664.5 539 64.2
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.6e-188 661.0 520 66.3
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 3.8e-187 658.7 527 64.3
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 6.4e-187 657.9 537 62.8
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 8.4e-187 657.5 493 69.0
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 1.4e-186 656.8 518 65.1
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 3.2e-186 655.6 498 68.9
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 4.3e-183 645.2 458 70.7
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 5.6e-183 644.8 524 63.4
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 2.1e-182 642.9 491 67.0
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 2.1e-182 642.9 533 64.0
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 3.6e-182 642.1 517 65.2
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 8.1e-182 641.0 521 64.5
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 1.8e-181 639.8 533 63.2
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.3e-179 633.6 503 64.6
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 7.1e-178 627.9 532 63.5
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 3.3e-175 619.0 519 64.4
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 7.4e-175 617.8 582 57.4
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 1.3e-174 617.1 465 66.0
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 8.1e-174 614.4 531 62.9
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 1.8e-173 613.2 522 61.7
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 1.7e-171 606.7 532 59.6
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 2.9e-171 605.9 486 64.4
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 2.7e-169 599.4 442 69.7
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 6.2e-166 588.2 416 70.7
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 1.4e-162 577.0 524 57.3
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 1.2e-161 573.9 539 56.8
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.1e-157 560.8 519 58.4
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 6.9e-157 558.1 468 63.2
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 9.3e-154 547.7 524 55.9
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 3.9e-152 542.3 524 55.2
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 1.1e-149 534.3 535 55.5
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 3.3e-143 512.7 539 55.7
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.8e-134 483.0 337 73.0
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 1.1e-133 481.1 466 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 6.1e-129 465.3 529 48.6
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 8.0e-129 464.9 351 69.2
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 1.8e-128 463.8 492 50.4
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 3.8e-123 446.0 466 50.4
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 2.4e-117 426.8 503 50.5
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.8e-109 400.6 346 62.1
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 1.6e-105 387.5 329 63.5
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 4.4e-103 379.4 314 63.4
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 4.4e-95 352.8 456 44.5
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 5.2e-88 329.3 261 65.5
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 1.3e-75 288.1 209 70.3
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.8e-64 251.1 209 60.8
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 1.7e-54 218.0 240 48.3
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 3.4e-47 193.7 451 31.7
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 1.2e-44 185.3 119 76.5
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 2.0e-39 167.9 111 73.9
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 1.2e-36 158.7 106 73.6
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 4.6e-36 156.8 305 41.3
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 4.1e-32 143.7 305 39.0
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 4.2e-29 133.7 75 82.7
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 6.1e-28 129.8 119 52.9
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.0e-27 129.0 94 63.8
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 1.7e-25 121.7 133 51.9
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.8e-24 118.2 109 53.2
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 8.8e-19 99.4 150 43.3
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 4.8e-17 93.6 68 69.1
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 5.9e-15 86.7 140 38.6
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 1.3e-14 85.5 161 37.9
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 1.3e-14 85.5 161 37.9
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 1.3e-14 85.5 128 43.0
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 5.0e-14 83.6 148 37.2
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 4.2e-13 80.5 296 26.7
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 1.6e-07 62.0 34 82.4
BraA09t38215Z Brassica rapa HOM05D006535 ORTHO05D033081 1.7e-06 58.5 31 87.1


User provided reference genes

Program Settings