Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G03590 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.5e-130 469.5 247 100.0
Carub.0006s3348 Capsella rubella HOM05D004201 ORTHO05D009648 1.6e-47 193.7 229 52.8
AL6G49230 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 1.2e-45 187.6 209 55.5
AL6G49220 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 2.2e-44 183.3 222 52.3
A03p20510 Brassica napus HOM05D004201 ORTHO05D009648 2.5e-32 143.3 224 43.8
BcaC01g06645 Brassica carinata HOM05D004201 ORTHO05D009648 8.1e-31 138.3 214 44.4
BcaB08g36118 Brassica carinata HOM05D004201 ORTHO05D009648 2.0e-29 133.7 211 45.0
Carub.0006s3347 Capsella rubella HOM05D004201 ORTHO05D009648 7.6e-29 131.7 225 43.6
C09p02940 Brassica napus HOM05D004201 ORTHO05D009648 3.2e-27 126.3 108 57.4
Carub.0006s3346 Capsella rubella HOM05D004201 ORTHO05D009648 2.1e-26 123.6 248 39.9
Carub.0006s3349 Capsella rubella HOM05D004201 ORTHO05D009648 3.5e-26 122.9 204 43.1
BraA09t35929Z Brassica rapa HOM05D004201 ORTHO05D009648 5.1e-25 119.0 196 41.8
AT4G03570 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.1e-23 113.6 171 44.4
BcaB08g36116 Brassica carinata HOM05D004201 ORTHO05D009648 3.7e-23 112.8 222 40.1
BraA09t35931Z Brassica rapa HOM05D004201 ORTHO05D009648 3.8e-20 102.8 61 78.7
AL3G16360 Arabidopsis lyrata HOM05D004201 ORTHO05D031360 1.1e-14 84.7 219 34.2
AL3G16370 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.1e-14 84.7 225 32.9
Carub.0006s1527 Capsella rubella HOM05D004201 ORTHO05D009648 1.0e-12 78.2 222 35.1
Carub.0006s1528 Capsella rubella HOM05D004201 ORTHO05D009648 5.0e-12 75.9 203 33.0
A03p08160 Brassica napus HOM05D004201 ORTHO05D009648 8.4e-12 75.1 133 38.3
C03p09420 Brassica napus HOM05D004201 ORTHO05D009648 8.4e-12 75.1 133 39.1
Thhalv10015849m.g Eutrema salsugineum HOM05D004201 ORTHO05D009648 5.5e-11 72.4 202 33.2
BcaB03g13238 Brassica carinata HOM05D004201 ORTHO05D009648 7.2e-11 72.0 154 33.8
BcaB01g04954 Brassica carinata HOM05D004201 ORTHO05D009648 2.7e-10 70.1 197 32.0
Carub.0006s1529 Capsella rubella HOM05D004201 ORTHO05D009648 2.7e-10 70.1 207 33.3
AL6G28110 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 7.9e-10 68.6 210 32.9
AT5G17110 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 7.9e-10 68.6 213 31.0
BcaB01g04951 Brassica carinata HOM05D004201 ORTHO05D009648 7.9e-10 68.6 215 29.3
AT5G17090 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.8e-09 67.4 173 34.7
Carub.0006s1531 Capsella rubella HOM05D004201 ORTHO05D009648 1.8e-09 67.4 150 34.0
AT5G17150 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 3.0e-09 66.6 159 35.2
BcaB01g04953 Brassica carinata HOM05D004201 ORTHO05D009648 3.0e-09 66.6 151 35.8
Carub.0006s1532 Capsella rubella HOM05D004201 ORTHO05D009648 3.9e-09 66.2 195 32.3
CARHR079840 Cardamine hirsuta HOM05D004201 ORTHO05D011677 5.1e-09 65.9 183 31.1
CARHR196090 Cardamine hirsuta HOM05D004201 ORTHO05D009648 5.1e-09 65.9 188 34.0
AT5G17100 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 6.7e-09 65.5 186 32.3
Carub.0006s1530 Capsella rubella HOM05D004201 ORTHO05D009648 6.7e-09 65.5 147 35.4
AT5G17120 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.1e-08 64.7 214 32.2
Aa31LG11G12560 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.5e-08 64.3 192 30.7
A03p08200 Brassica napus HOM05D004201 ORTHO05D009648 1.5e-08 64.3 166 31.3
BcaB01g05229 Brassica carinata HOM05D004201 ORTHO05D009648 2.5e-08 63.5 192 32.3
AL1G13240 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 4.3e-08 62.8 207 30.4
Aa31LG11G12620 Aethionema arabicum HOM05D004201 ORTHO05D009648 5.7e-08 62.4 216 28.7
AL6G28150 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 7.4e-08 62.0 211 30.8
BcaB02g06909 Brassica carinata HOM05D004201 ORTHO05D012052 7.4e-08 62.0 204 30.4
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 9.7e-08 61.6 97 36.1
BcaB01g05224 Brassica carinata HOM05D004201 ORTHO05D009648 9.7e-08 61.6 218 29.4
BraA03t10141Z Brassica rapa HOM05D004201 ORTHO05D009648 9.7e-08 61.6 174 29.3
BraA08t35247Z Brassica rapa HOM05D004201 ORTHO05D009648 9.7e-08 61.6 84 44.0
A10p02210 Brassica napus HOM05D004201 ORTHO05D012052 2.2e-07 60.5 195 30.3
A10p02260 Brassica napus HOM05D004201 ORTHO05D012052 2.2e-07 60.5 199 31.2
C09p60060 Brassica napus HOM05D004201 ORTHO05D009648 2.2e-07 60.5 153 34.0
BolC9t58841H Brassica oleracea HOM05D004201 ORTHO05D009648 2.2e-07 60.5 153 34.0
BraA10t42492Z Brassica rapa HOM05D004201 ORTHO05D012052 2.2e-07 60.5 199 31.2
AL3G16060 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.8e-07 60.1 105 35.2
BcaB01g04955 Brassica carinata HOM05D004201 ORTHO05D009648 2.8e-07 60.1 155 35.5
BcaB01g05220 Brassica carinata HOM05D004201 ORTHO05D009648 2.8e-07 60.1 186 29.6
BcaB01g05223 Brassica carinata HOM05D004201 ORTHO05D009648 2.8e-07 60.1 186 29.6
BraA10t42489Z Brassica rapa HOM05D004201 ORTHO05D012052 2.8e-07 60.1 194 30.4
BolC5t34836H Brassica oleracea HOM05D004201 ORTHO05D011677 3.7e-07 59.7 181 34.8
Aa31LG11G12490 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.8e-07 59.3 204 31.4
Aa31LG11G12550 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.8e-07 59.3 192 30.7
C05p02080 Brassica napus HOM05D004201 ORTHO05D012052 4.8e-07 59.3 153 32.0
BolC5t28985H Brassica oleracea HOM05D004201 ORTHO05D012052 4.8e-07 59.3 153 32.0
BcaC06g31919 Brassica carinata HOM05D004201 ORTHO05D009648 6.3e-07 58.9 192 29.2
BraA01t04445Z Brassica rapa HOM05D014826 ORTHO05D014863 1.1e-06 58.2 127 34.6
BraA03t10139Z Brassica rapa HOM05D004201 ORTHO05D009648 1.1e-06 58.2 163 33.1
Thhalv10008370m.g Eutrema salsugineum HOM05D004201 ORTHO05D012052 1.1e-06 58.2 185 31.9
BcaB01g05230 Brassica carinata HOM05D004201 ORTHO05D009648 1.4e-06 57.8 80 42.5
BcaC07g38685 Brassica carinata HOM05D004201 ORTHO05D009648 1.4e-06 57.8 192 29.2
BolC8t49120H Brassica oleracea HOM05D004201 ORTHO05D009648 1.4e-06 57.8 192 29.2
Aa31LG11G12500 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.8e-06 57.4 175 30.3
Aa31LG11G12820 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.8e-06 57.4 194 29.4
AL1G13220 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.8e-06 57.4 126 33.3
BcaB01g05228 Brassica carinata HOM05D004201 ORTHO05D009648 3.1e-06 56.6 163 33.1
A08p33280 Brassica napus HOM05D004201 ORTHO05D009648 3.1e-06 56.6 192 28.6
AL1G13200 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 4.1e-06 56.2 193 30.6
AL1G13250 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 5.3e-06 55.8 184 31.5
Aa31LG11G12540 Aethionema arabicum HOM05D004201 ORTHO05D009648 6.9e-06 55.5 143 32.2
BcaB01g05221 Brassica carinata HOM05D004201 ORTHO05D009648 6.9e-06 55.5 80 41.2
A03p08170 Brassica napus HOM05D004201 ORTHO05D009648 6.9e-06 55.5 161 32.3
A03p08180 Brassica napus HOM05D004201 ORTHO05D009648 6.9e-06 55.5 80 41.2
C03p09490 Brassica napus HOM05D004201 ORTHO05D009648 9.0e-06 55.1 156 30.8
BolC3t13435H Brassica oleracea HOM05D004201 ORTHO05D009648 9.0e-06 55.1 216 28.2


User provided reference genes

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