Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G03505 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.0e-78 294.7 144 100.0
Thhalv10029249m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 3.5e-18 95.5 92 52.2
CARHR251850 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.0e-17 94.0 101 53.5
Sp6g03520 Schrenkiella parvula HOM05D000264 ORTHO05D000152 5.1e-17 91.7 95 52.6
Carub.0006s3358 Capsella rubella HOM05D000264 ORTHO05D000152 8.7e-17 90.9 94 55.3
Carub.0006s3357 Capsella rubella HOM05D000264 ORTHO05D000152 1.1e-14 84.0 88 52.3
AT4G03470 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.6e-13 79.3 94 50.0
AT4G05040 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.9e-11 73.2 87 49.4
Thhalv10002422m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 2.4e-11 72.8 79 50.6
AT4G14390 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.3e-09 67.0 90 45.6
Carub.0007s2784 Capsella rubella HOM05D000264 ORTHO05D000152 1.8e-09 66.6 81 48.1
AL7G41820 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 1.6e-07 60.1 93 39.8
A09p02780 Brassica napus HOM05D000264 ORTHO05D000152 1.6e-07 60.1 87 40.2
AL6G49420 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 2.1e-07 59.7 79 40.5
AT4G03440 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.8e-07 58.5 91 39.6
BcaC01g06674 Brassica carinata HOM05D000264 ORTHO05D027696 4.8e-07 58.5 49 49.0
C03p36720 Brassica napus HOM05D000264 ORTHO05D000152 4.8e-07 58.5 49 49.0
BolC3t15986H Brassica oleracea HOM05D000264 ORTHO05D000152 4.8e-07 58.5 49 49.0
BraA03t12223Z Brassica rapa HOM05D000264 ORTHO05D000152 4.8e-07 58.5 49 49.0
C03p84220 Brassica napus HOM05D000264 ORTHO05D000152 8.1e-07 57.8 124 31.5
BolC3t20701H Brassica oleracea HOM05D000264 ORTHO05D000152 8.1e-07 57.8 124 31.5
AT4G03480 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.1e-06 57.4 49 55.1
BcaB01g01945 Brassica carinata HOM05D000264 ORTHO05D000152 1.1e-06 57.4 88 40.9
A09p02790 Brassica napus HOM05D000264 ORTHO05D000152 1.4e-06 57.0 91 38.5
BraA09t35920Z Brassica rapa HOM05D000264 ORTHO05D000152 1.4e-06 57.0 91 38.5
BcaC04g23968 Brassica carinata HOM05D000264 ORTHO05D000152 2.4e-06 56.2 92 38.0
BolC9t53212H Brassica oleracea HOM05D000264 ORTHO05D000152 2.4e-06 56.2 78 44.9
Thhalv10002620m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 2.4e-06 56.2 56 51.8
C09p02870 Brassica napus HOM05D000264 ORTHO05D000152 3.1e-06 55.8 92 38.0
AT4G14400 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.0e-06 55.5 49 51.0
Thhalv10028485m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 6.9e-06 54.7 77 41.6


User provided reference genes

Program Settings