Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.7e-103 378.6 188 100.0
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 4.5e-98 361.3 188 96.3
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.1e-95 352.4 188 94.7
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.5e-90 336.3 188 89.4
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 6.7e-86 320.9 188 85.1
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 4.4e-85 318.2 189 87.3
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 9.1e-83 310.5 189 84.1
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 5.9e-82 307.8 189 83.6
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 2.2e-81 305.8 189 83.1
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 5.0e-81 304.7 189 83.1
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 5.0e-81 304.7 189 83.1
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 6.5e-81 304.3 189 82.5
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.7e-79 298.1 189 81.0
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 6.7e-78 294.3 211 73.0
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 8.8e-78 293.9 189 80.4
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.2e-73 279.3 189 78.8
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 6.8e-62 241.1 190 65.8
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 2.3e-57 226.1 188 60.6
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 3.3e-56 222.2 195 60.0
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-55 219.9 195 62.6
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.8e-55 219.2 189 60.3
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.7e-55 218.4 193 62.7
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 4.7e-55 218.4 196 62.2
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 8.0e-55 217.6 195 62.6
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 3.0e-54 215.7 196 61.2
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.0e-54 215.3 200 59.0
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 6.8e-54 214.5 126 79.4
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 8.9e-54 214.2 193 60.6
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 8.9e-54 214.2 190 57.9
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 8.9e-54 214.2 189 61.9
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.2e-53 213.8 142 71.1
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-53 213.4 195 61.0
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.6e-53 212.6 132 74.2
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.6e-53 212.6 193 56.5
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 5.7e-53 211.5 129 75.2
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 7.5e-53 211.1 190 60.5
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.7e-52 209.9 202 58.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.2e-52 209.5 201 57.7
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.9e-52 209.1 199 56.8
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 2.9e-52 209.1 222 52.3
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.7e-52 208.8 199 58.3
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 4.9e-52 208.4 195 56.4
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 4.9e-52 208.4 200 57.0
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 4.9e-52 208.4 196 54.6
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.1e-51 207.2 126 73.8
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.4e-51 206.8 125 75.2
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.4e-51 206.8 126 73.8
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.4e-51 206.8 195 58.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.8e-51 206.5 124 74.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.4e-51 206.1 142 68.3
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 3.2e-51 205.7 125 75.2
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.2e-51 205.7 174 58.6
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 4.1e-51 205.3 126 72.2
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.1e-51 205.3 194 59.8
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.1e-51 205.3 126 73.8
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 5.4e-51 204.9 195 56.9
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 5.4e-51 204.9 182 59.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 7.0e-51 204.5 125 74.4
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 7.0e-51 204.5 219 55.3
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 9.2e-51 204.1 190 57.4
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.2e-50 203.8 196 57.7
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.6e-50 203.4 125 72.0
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 2.0e-50 203.0 198 55.6
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 4.6e-50 201.8 125 75.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 4.6e-50 201.8 126 72.2
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.6e-50 201.8 187 53.5
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 7.8e-50 201.1 125 73.6
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 7.8e-50 201.1 142 68.3
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.0e-49 200.7 125 72.0
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.0e-49 200.7 125 74.4
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.0e-49 200.7 125 74.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 1.3e-49 200.3 133 68.4
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.3e-49 200.3 137 68.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.7e-49 199.9 125 72.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.7e-49 199.9 125 72.8
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 2.3e-49 199.5 125 71.2
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.3e-49 199.5 125 70.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 5.0e-49 198.4 193 54.9
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 5.0e-49 198.4 193 57.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 5.0e-49 198.4 132 69.7
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 1.1e-48 197.2 193 56.5
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.9e-48 196.4 188 57.4
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 2.5e-48 196.1 197 57.4
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 7.3e-48 194.5 182 57.1
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 7.3e-48 194.5 190 55.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.2e-47 193.7 192 53.1
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.6e-47 193.4 190 55.8
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.6e-47 193.4 136 69.1
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.8e-47 192.6 125 70.4
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.0e-47 191.0 173 59.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.1e-46 190.7 158 60.8
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.8e-46 189.9 125 68.8
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.8e-46 189.9 123 68.3
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 8.9e-46 187.6 140 65.7
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.2e-45 187.2 111 75.7
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 2.0e-45 186.4 197 54.3
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.6e-45 186.0 123 67.5
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.7e-44 183.3 158 55.1
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.1e-43 180.6 113 75.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 1.4e-43 180.3 112 75.0
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.4e-43 179.5 171 56.7
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 4.6e-42 175.3 116 70.7
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 7.8e-42 174.5 119 64.7
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.0e-41 172.6 225 48.4
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.0e-41 171.8 174 51.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 5.0e-41 171.8 116 71.6
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.3e-38 162.9 143 53.1
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.1e-38 162.5 93 83.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 8.9e-38 161.0 115 66.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 7.5e-37 157.9 126 59.5
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.9e-36 156.0 122 63.1
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 8.3e-36 154.5 91 76.9
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.3e-32 142.5 146 56.2
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 3.3e-32 142.5 109 60.6
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 5.6e-32 141.7 141 58.9
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 6.2e-31 138.3 89 68.5
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 8.1e-31 137.9 153 52.9
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 2.4e-30 136.3 80 77.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.0e-30 135.6 82 74.4
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 2.0e-29 133.3 109 58.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 3.4e-29 132.5 84 76.2
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 2.2e-28 129.8 113 52.2
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 5.4e-27 125.2 73 78.1
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.9e-25 119.0 116 48.3
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 4.3e-24 115.5 71 74.6
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 3.1e-22 109.4 97 50.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 3.8e-20 102.4 111 45.0
CARHR152490 Cardamine hirsuta HOM05D005819 ORTHO05D006780 6.0e-18 95.1 66 81.8
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.3e-16 89.4 117 47.9
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.6e-15 87.0 79 54.4
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 6.2e-15 85.1 111 39.6
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.5e-13 80.5 230 28.7
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 3.8e-12 75.9 49 67.3
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.3e-07 60.8 130 30.0
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 5.3e-06 55.5 42 59.5


User provided reference genes

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