Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 1.7e-64 249.2 129 100.0
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 8.5e-64 246.9 129 99.2
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 8.5e-64 246.9 129 99.2
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 2.5e-63 245.4 129 96.9
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 3.2e-63 245.0 129 97.7
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 5.5e-63 244.2 129 96.1
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 5.5e-63 244.2 129 96.1
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 5.5e-63 244.2 129 96.1
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 9.4e-63 243.4 129 95.3
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 1.2e-62 243.0 129 95.3
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 1.0e-61 240.0 132 94.7
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 2.3e-61 238.8 126 95.2
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 3.0e-61 238.4 136 91.9
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 7.4e-60 233.8 142 87.3
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 9.7e-60 233.4 126 92.1
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 2.2e-59 232.3 142 86.6
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 2.8e-59 231.9 126 91.3
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 4.1e-58 228.0 126 89.7
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 5.3e-58 227.6 126 88.9
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 6.9e-58 227.3 126 88.9
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 6.9e-58 227.3 126 88.9
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 2.6e-57 225.3 126 88.9
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 2.6e-57 225.3 126 87.3
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 2.6e-57 225.3 126 88.9
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 3.4e-57 224.9 126 87.3
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 3.4e-57 224.9 126 87.3
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 4.5e-57 224.6 126 87.3
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 4.5e-57 224.6 126 87.3
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 7.7e-57 223.8 126 87.3
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 7.7e-57 223.8 126 87.3
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 7.7e-57 223.8 126 84.9
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.3e-56 223.0 126 86.5
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 1.3e-56 223.0 126 85.7
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.7e-56 222.6 126 86.5
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.7e-56 222.6 126 86.5
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 1.7e-56 222.6 126 86.5
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 1.7e-56 222.6 126 86.5
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 85.7
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 85.7
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 86.5
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 87.3
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 87.3
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.2e-56 222.2 126 85.7
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 2.9e-56 221.9 126 86.5
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.9e-56 221.9 126 86.5
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 2.9e-56 221.9 126 86.5
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 3.8e-56 221.5 126 85.7
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 3.8e-56 221.5 126 85.7
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 5.0e-56 221.1 126 84.9
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 5.0e-56 221.1 126 84.9
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 5.0e-56 221.1 126 85.7
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 6.5e-56 220.7 126 85.7
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.5e-56 220.7 126 84.9
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 6.5e-56 220.7 126 85.7
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 8.5e-56 220.3 123 87.0
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 8.5e-56 220.3 126 84.9
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 8.5e-56 220.3 126 85.7
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.1e-55 219.9 126 85.7
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 1.1e-55 219.9 126 84.9
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 1.1e-55 219.9 126 84.1
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 1.4e-55 219.5 126 84.1
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 1.4e-55 219.5 126 84.9
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 1.4e-55 219.5 126 84.9
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 83.3
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.1
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.1
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 84.9
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 85.7
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 1.9e-55 219.2 126 83.3
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 2.5e-55 218.8 126 84.9
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.5e-55 218.8 126 84.9
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 2.5e-55 218.8 126 82.5
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 2.5e-55 218.8 126 84.1
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 2.5e-55 218.8 126 84.1
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 3.2e-55 218.4 126 84.9
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 3.2e-55 218.4 126 84.9
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 3.2e-55 218.4 126 84.9
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 4.2e-55 218.0 126 82.5
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 4.2e-55 218.0 126 85.7
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 5.5e-55 217.6 126 84.1
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.5e-55 217.6 126 86.5
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 5.5e-55 217.6 126 82.5
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 7.2e-55 217.2 126 82.5
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 7.2e-55 217.2 126 85.7
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 9.4e-55 216.9 126 83.3
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 82.5
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 82.5
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 81.7
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 84.1
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 83.3
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 83.3
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 82.5
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 82.5
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 82.5
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 82.5
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 2.1e-54 215.7 126 84.9
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 2.7e-54 215.3 126 84.9
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 3.6e-54 214.9 126 83.3
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 4.7e-54 214.5 126 82.5
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 4.7e-54 214.5 126 81.7
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 6.1e-54 214.2 126 81.0
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 6.1e-54 214.2 126 84.9
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 7.9e-54 213.8 126 83.3
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 1.0e-53 213.4 126 82.5
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-53 213.0 126 81.0
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 1.8e-53 212.6 126 81.0
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 1.8e-53 212.6 126 81.0
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 1.8e-53 212.6 126 83.3
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 2.3e-53 212.2 126 81.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 2.3e-53 212.2 126 81.0
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 2.3e-53 212.2 126 80.2
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 5.2e-53 211.1 126 82.5
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.2e-53 211.1 126 81.7
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 6.7e-53 210.7 126 80.2
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 1.5e-52 209.5 126 82.5
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 1.5e-52 209.5 126 82.5
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 2.0e-52 209.1 126 80.2
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 2.2e-51 205.7 126 80.2
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 2.2e-51 205.7 126 81.0
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.7e-51 204.9 126 81.0
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 4.8e-51 204.5 110 89.1
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 1.8e-50 202.6 110 88.2
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 4.1e-50 201.4 110 88.2
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 1.6e-49 199.5 110 88.2
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 2.0e-49 199.1 110 85.5
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 7.7e-49 197.2 105 90.5
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 2.9e-48 195.3 155 66.5
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 1.9e-47 192.6 124 72.6
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.5e-47 192.2 106 84.9
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.5e-47 192.2 124 73.4
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 4.2e-47 191.4 119 74.8
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 3.6e-46 188.3 151 66.9
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 4.7e-46 188.0 111 78.4
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-45 186.4 117 78.6
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 1.8e-45 186.0 101 92.1
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 1.5e-44 183.0 117 76.1
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 2.0e-44 182.6 122 69.7
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 5.7e-44 181.0 126 74.6
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 7.5e-44 180.6 100 85.0
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-43 179.5 105 78.1
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-43 179.5 105 78.1
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.2e-43 179.1 102 79.4
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 2.8e-43 178.7 118 70.3
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-40 169.5 102 75.5
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.1e-38 162.5 110 75.5
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.1e-38 162.5 110 75.5
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 4.0e-37 158.3 126 69.8
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 1.5e-36 156.4 115 61.7
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 1.5e-36 156.4 108 65.7
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.4e-36 155.2 112 65.2
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 4.4e-36 154.8 126 65.9
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 5.7e-36 154.5 114 61.4
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 5.9e-33 144.4 79 86.1
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 5.9e-33 144.4 84 82.1
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.7e-32 142.9 98 71.4
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 6.5e-32 141.0 79 83.5
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 3.6e-30 135.2 77 80.5
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 1.8e-29 132.9 156 53.8
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 2.0e-28 129.4 80 77.5
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 9.2e-26 120.6 76 73.7
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 2.0e-25 119.4 117 47.9
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 2.7e-25 119.0 77 71.4
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-23 112.8 63 82.5
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.8e-21 106.3 69 76.8
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.0e-20 102.8 57 84.2
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 8.3e-19 97.4 50 90.0
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 3.2e-18 95.5 47 93.6
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 3.2e-18 95.5 47 93.6
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 2.7e-17 92.4 67 62.7
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 4.0e-13 78.6 58 67.2
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 2.6e-12 75.9 48 75.0
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 8.3e-11 70.9 35 88.6
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.1e-10 70.5 35 85.7


User provided reference genes

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