Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 5.9e-110 401.0 217 100.0
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 5.2e-106 387.9 217 98.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 3.2e-100 368.6 220 93.2
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 5.7e-97 357.8 220 90.0
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.8e-95 352.8 221 88.7
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 2.0e-89 332.8 221 85.1
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 9.8e-89 330.5 221 84.2
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.2e-88 329.3 221 84.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.4e-87 326.6 221 83.3
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-87 326.2 221 83.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 9.2e-87 323.9 220 83.6
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 9.2e-79 297.4 230 76.5
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 7.5e-73 277.7 227 72.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.6e-57 226.1 175 69.7
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.3e-56 223.8 173 71.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.9e-56 222.6 173 69.9
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 6.4e-56 221.5 221 59.7
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 8.4e-56 221.1 173 69.9
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 8.4e-56 221.1 180 69.4
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.4e-55 219.5 198 64.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.2e-55 219.2 208 61.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 4.2e-55 218.8 223 59.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 7.1e-55 218.0 173 70.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.6e-54 216.9 233 57.1
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 2.7e-54 216.1 239 56.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 3.5e-54 215.7 229 56.8
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.6e-54 215.3 221 57.9
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 4.6e-54 215.3 194 63.4
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 7.8e-54 214.5 173 68.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.0e-53 214.2 206 59.2
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.0e-53 214.2 173 68.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.0e-53 214.2 173 68.2
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.0e-53 214.2 188 65.4
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.3e-53 213.8 198 62.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 2.3e-53 213.0 212 60.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 2.3e-53 213.0 200 61.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.0e-53 212.6 212 60.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 3.9e-53 212.2 225 57.8
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.9e-53 212.2 220 58.2
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.9e-53 212.2 173 67.6
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.1e-53 211.8 173 68.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.1e-53 211.8 225 58.7
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 5.1e-53 211.8 212 57.5
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 8.7e-53 211.1 227 56.4
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.5e-52 210.3 232 55.6
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.5e-52 210.3 197 59.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-52 209.9 223 55.6
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.9e-52 209.9 218 56.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.3e-52 209.1 173 67.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.3e-52 209.1 173 65.3
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.3e-52 208.8 173 66.5
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.3e-52 208.8 218 58.3
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.3e-52 208.8 212 57.1
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.6e-52 208.4 153 72.5
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 7.3e-52 208.0 186 62.9
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 7.3e-52 208.0 225 57.3
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.6e-52 207.6 176 64.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 9.6e-52 207.6 205 60.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.6e-51 206.8 233 54.9
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.6e-51 206.8 233 56.2
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.1e-51 206.5 216 58.3
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.1e-51 206.5 199 57.8
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 6.2e-51 204.9 217 57.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 6.2e-51 204.9 173 67.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 6.2e-51 204.9 214 57.5
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 8.1e-51 204.5 197 60.9
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 8.1e-51 204.5 179 63.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.1e-50 204.1 223 56.1
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.1e-50 204.1 217 58.5
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.1e-50 204.1 214 58.4
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.4e-50 203.0 173 65.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 5.3e-50 201.8 185 63.2
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.9e-50 201.4 173 64.2
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.2e-49 200.7 228 52.2
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.4e-49 199.1 173 65.3
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 7.6e-49 198.0 182 62.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.3e-48 197.2 215 58.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.4e-47 193.0 195 56.9
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.4e-47 193.0 216 53.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 3.2e-47 192.6 147 68.7
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 9.3e-47 191.0 191 57.6
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 9.3e-47 191.0 140 80.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.1e-46 189.9 147 68.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 173 65.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 173 65.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 196 58.2
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.5e-46 189.1 147 68.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.5e-46 189.1 214 54.7
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.0e-46 188.3 145 68.3
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.8e-45 186.8 177 59.9
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.0e-45 186.0 200 56.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.9e-45 185.7 222 54.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 3.9e-45 185.7 204 55.9
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.9e-45 185.7 204 52.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 6.7e-45 184.9 214 53.3
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 8.7e-45 184.5 208 53.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.1e-44 184.1 134 70.9
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.5e-44 183.0 214 53.3
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.6e-43 180.3 223 51.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 2.8e-43 179.5 253 47.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.2e-43 178.3 165 60.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-42 177.2 111 84.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.8e-42 176.8 161 58.4
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.4e-41 172.6 209 51.2
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 7.6e-41 171.4 111 81.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.0e-37 159.5 147 61.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.9e-37 159.1 176 54.5
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.0e-29 132.9 129 61.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.0e-29 132.9 145 51.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.9e-29 132.5 199 47.2
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 5.1e-29 132.1 75 93.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 8.7e-29 131.3 90 75.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.9e-28 130.2 144 51.4
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.3e-28 129.0 144 49.3
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.1e-27 126.7 113 71.7
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 3.7e-27 125.9 197 46.2
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.5e-25 120.6 199 38.2
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 4.5e-25 119.0 155 49.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.8e-24 115.9 104 54.8
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.7e-17 91.7 106 47.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 8.5e-16 88.2 165 33.9
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.4e-07 58.2 64 57.8


User provided reference genes

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