Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 3.9e-66 254.6 123 100.0
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 9.9e-62 240.0 123 93.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.1e-55 219.9 124 87.1
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.6e-54 215.3 123 82.9
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 3.4e-54 214.9 123 83.7
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.2e-53 212.2 119 84.9
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 6.4e-53 210.7 122 78.7
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 8.4e-53 210.3 122 78.7
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 1.4e-52 209.5 123 82.1
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.9e-52 209.1 122 78.7
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 9.3e-52 206.8 123 77.2
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 9.3e-52 206.8 123 77.2
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 9.3e-52 206.8 123 77.2
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.1e-51 205.7 123 77.2
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.6e-48 196.1 120 77.5
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.3e-42 175.6 120 70.8
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.1e-41 173.3 120 67.5
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.1e-41 173.3 119 66.4
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.1e-41 173.3 117 66.7
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.1e-41 173.3 117 67.5
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 5.6e-41 171.0 117 64.1
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.3e-40 169.9 119 66.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.7e-40 168.3 117 65.0
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 3.7e-40 168.3 117 63.2
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 3.7e-40 168.3 121 63.6
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 4.8e-40 167.9 117 66.7
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 4.8e-40 167.9 120 65.8
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 6.2e-40 167.5 121 64.5
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 8.1e-40 167.2 120 64.2
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.1e-39 166.8 118 63.6
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.4e-39 166.4 118 63.6
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 2.4e-39 165.6 120 65.0
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.4e-39 165.6 120 64.2
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.4e-39 165.6 116 65.5
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 3.1e-39 165.2 117 62.4
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 4.0e-39 164.9 118 62.7
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 6.9e-39 164.1 117 63.2
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.2e-38 163.3 120 62.5
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.5e-38 162.9 117 63.2
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.5e-38 162.9 120 61.7
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.5e-38 162.9 116 66.4
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 2.0e-38 162.5 120 61.7
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 2.0e-38 162.5 119 63.0
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 2.6e-38 162.2 117 63.2
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.6e-38 162.2 121 62.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 3.4e-38 161.8 109 69.7
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 4.5e-38 161.4 119 63.0
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 5.8e-38 161.0 120 60.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 7.6e-38 160.6 118 63.6
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 7.6e-38 160.6 119 63.0
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 1.3e-37 159.8 116 62.1
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.7e-37 159.5 119 58.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.7e-37 159.5 119 60.5
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 2.9e-37 158.7 118 59.3
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 4.9e-37 157.9 118 62.7
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.1e-36 156.8 120 60.0
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.1e-36 156.8 120 60.0
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.1e-36 156.8 123 61.0
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.1e-36 156.8 120 62.5
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.4e-36 156.4 118 58.5
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 4.2e-36 154.8 118 59.3
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 5.5e-36 154.5 119 58.8
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 5.5e-36 154.5 119 58.8
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.6e-35 152.9 141 52.5
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 2.1e-35 152.5 119 59.7
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 2.7e-35 152.1 120 62.5
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.0e-34 150.2 119 58.8
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.3e-34 149.1 116 58.6
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.0e-34 148.7 119 58.0
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 5.1e-34 147.9 119 56.3
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.1e-33 146.7 120 56.7
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 4.3e-33 144.8 107 61.7
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 7.4e-33 144.1 123 56.1
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.1e-31 140.2 99 64.6
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.8e-31 139.4 120 53.3
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.8e-31 139.4 104 59.6
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.0e-31 138.3 116 56.0
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.6e-30 135.6 146 47.9
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.7e-29 132.9 122 54.1
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.1e-28 130.2 113 54.9
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.3e-28 127.1 96 59.4
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.3e-26 123.2 119 48.7
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.5e-25 119.8 120 49.2
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.9e-25 119.4 111 55.9
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 4.8e-24 114.8 80 65.0
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.3e-21 106.7 117 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.2e-19 100.1 114 45.6
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.6e-19 98.6 78 60.3
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.1e-17 93.6 76 59.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.9e-17 92.8 87 54.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.2e-16 89.4 79 57.0
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 8.2e-16 87.4 59 64.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.8e-15 86.3 107 43.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.7e-11 72.4 104 41.3
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 5.9e-06 54.7 41 56.1


User provided reference genes

Program Settings