Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 3.7e-103 378.3 198 100.0
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 3.5e-93 345.1 193 92.7
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 6.8e-89 330.9 194 90.2
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.1e-82 309.3 194 85.1
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 8.1e-82 307.4 198 82.8
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 4.0e-81 305.1 194 83.5
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 3.4e-80 302.0 194 82.5
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.4e-80 302.0 198 84.8
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.7e-76 289.7 223 72.6
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.1e-75 287.0 222 72.1
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.8e-66 255.0 194 68.6
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 9.0e-65 250.8 194 69.1
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 2.6e-64 249.2 194 69.1
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 3.4e-64 248.8 194 69.6
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 3.4e-64 248.8 197 65.5
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.3e-63 246.9 194 68.6
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 4.9e-63 245.0 194 68.6
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 6.5e-63 244.6 194 66.5
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 2.5e-62 242.7 194 68.0
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 2.5e-62 242.7 194 68.0
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 7.1e-62 241.1 197 69.0
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 4.6e-61 238.4 194 66.0
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.1e-57 227.3 192 64.1
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-53 213.8 193 59.1
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 3.0e-52 209.1 195 55.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 7.4e-51 204.5 193 56.0
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 3.7e-50 202.2 193 56.5
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 8.2e-50 201.1 193 54.9
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 8.2e-50 201.1 193 56.0
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.1e-49 200.7 193 54.4
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 1.4e-49 200.3 193 54.4
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.4e-49 200.3 192 56.2
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 2.4e-49 199.5 196 52.6
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 3.1e-49 199.1 193 54.4
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 4.1e-49 198.7 193 53.4
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 5.3e-49 198.4 193 54.9
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 9.0e-49 197.6 200 53.0
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.2e-48 197.2 193 53.9
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 4.5e-48 195.3 193 53.9
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 1.7e-47 193.4 193 51.3
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 2.2e-47 193.0 195 52.3
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 2.9e-47 192.6 193 56.0
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 5.0e-47 191.8 200 52.0
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 5.0e-47 191.8 193 54.9
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 5.0e-47 191.8 201 51.7
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.1e-46 190.7 193 56.5
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.1e-46 190.7 193 56.5
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.1e-46 190.7 193 52.3
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 3.2e-46 189.1 195 53.3
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 4.2e-46 188.7 193 53.9
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 2.1e-45 186.4 193 50.8
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 3.6e-45 185.7 196 51.0
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.6e-45 185.3 199 55.3
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.0e-44 184.1 193 51.8
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 1.0e-44 184.1 196 51.0
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 2.3e-44 183.0 193 49.7
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 5.1e-44 181.8 194 52.6
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 8.8e-44 181.0 193 50.3
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.1e-43 180.6 191 50.8
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 2.0e-43 179.9 193 52.3
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 2.5e-43 179.5 193 50.3
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 2.5e-43 179.5 192 53.1
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 3.3e-43 179.1 189 50.8
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 5.7e-43 178.3 192 50.0
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 5.7e-43 178.3 192 53.1
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 5.7e-43 178.3 192 53.1
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 7.4e-43 177.9 189 50.3
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 9.7e-43 177.6 193 49.2
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 1.7e-42 176.8 192 52.1
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 2.2e-42 176.4 193 48.2
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.8e-42 176.0 203 52.7
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.8e-42 176.0 191 49.7
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 8.2e-42 174.5 193 49.7
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.4e-41 173.7 196 48.5
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 2.0e-40 169.9 170 51.2
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.7e-39 166.8 193 46.1
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 3.8e-39 165.6 147 62.6
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 5.0e-39 165.2 190 45.8
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 6.5e-39 164.9 200 48.0
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 8.5e-39 164.5 190 47.4
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.5e-38 161.8 206 51.0
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 7.2e-38 161.4 197 47.2
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 7.2e-38 161.4 193 47.2
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 2.7e-37 159.5 197 43.1
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 3.9e-36 155.6 138 53.6
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 6.7e-36 154.8 191 45.0
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 7.4e-35 151.4 205 42.0
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 2.2e-34 149.8 277 40.1
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.4e-33 147.1 194 42.3
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 1.8e-33 146.7 277 40.1
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.2e-32 144.1 193 43.5
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 1.2e-32 144.1 192 42.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 3.2e-30 136.0 279 35.8
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 4.2e-30 135.6 193 42.5
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.1e-29 133.3 183 47.0
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.6e-29 132.5 195 46.7
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 4.0e-28 129.0 170 43.5
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.1e-27 127.5 85 65.9
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 2.0e-27 126.7 195 44.1
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 2.6e-27 126.3 153 49.7
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 5.7e-27 125.2 156 44.9
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 1.3e-26 124.0 198 37.9
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.7e-26 123.6 169 43.2
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.1e-25 119.0 104 51.9
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-24 116.3 71 66.2
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.5e-24 115.9 71 66.2
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.3e-23 114.0 190 37.9
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 2.2e-23 113.2 168 42.3
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.9e-22 110.2 93 55.9
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 9.4e-22 107.8 194 38.7
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-21 107.5 190 36.3
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 2.1e-21 106.7 205 35.6
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.0e-20 104.4 205 38.5
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 3.0e-20 102.8 119 46.2
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.4e-17 94.0 233 33.9
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 2.9e-15 86.3 81 66.7
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 1.6e-13 80.5 198 31.3
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 2.7e-13 79.7 92 59.8
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 3.4e-11 72.8 209 27.8
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.4e-11 72.8 106 47.2
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.2e-10 70.1 159 34.0
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-08 63.2 118 42.4
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 2.7e-08 63.2 104 40.4
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.0e-07 61.2 46 71.7


User provided reference genes

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