Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G01335 Arabidopsis thaliana HOM05D001988 ORTHO05D019756 4.3e-55 217.6 101 100.0
Carub.0006s3640 Capsella rubella HOM05D001988 ORTHO05D004985 2.0e-23 112.5 107 60.7
Thhalv10027666m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 9.1e-21 103.6 99 57.6
AL6G52060 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 1.1e-18 96.7 99 55.6
AL5G12570 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 3.9e-16 88.2 103 50.5
AT4G01340 Arabidopsis thaliana HOM05D001988 ORTHO05D019756 8.8e-16 87.0 59 71.2
Sp7g05500 Schrenkiella parvula HOM05D001988 ORTHO05D004985 1.1e-15 86.7 100 53.0
Aa31LG2G7390 Aethionema arabicum HOM05D001988 ORTHO05D004985 8.2e-14 80.5 94 51.1
Carub.0005s0183 Capsella rubella HOM05D001988 ORTHO05D004985 1.4e-13 79.7 110 47.3
AT2G02955 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 4.1e-13 78.2 83 55.4
CARHR145370 Cardamine hirsuta HOM05D001988 ORTHO05D004985 3.5e-12 75.1 111 46.8
Sp2g13990 Schrenkiella parvula HOM05D001988 ORTHO05D004985 2.5e-10 68.9 49 65.3
BolC8t52776H Brassica oleracea HOM05D001988 ORTHO05D004985 7.2e-10 67.4 52 65.4
A09p68050 Brassica napus HOM05D001988 ORTHO05D004985 1.6e-09 66.2 52 65.4
BcaC07g42212 Brassica carinata HOM05D001988 ORTHO05D004985 6.1e-09 64.3 52 63.5
C08p52490 Brassica napus HOM05D001988 ORTHO05D004985 6.1e-09 64.3 52 63.5
BraA09t42140Z Brassica rapa HOM05D001988 ORTHO05D004985 1.4e-08 63.2 52 61.5
AL7G47160 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 7.5e-07 57.4 38 71.1


User provided reference genes

Program Settings